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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062985 ID=TCONS_00062985|Name=TCONS_00062985|organism=Clytia hemisphaerica|type=transcript|length=976bp
ccaGTCCAGTTCACTGATGAATCCATCTTTCTGTCTGATTGTTTATGGCT
ATGGTGTGGTGATGACGCTTTTGTTTGGCAGTTCTGCCTGGTAACTTCGT
CTGGCAGTCTGAAGTCTTTCTTAACAAAtctgttttgtttacatttttga
tcACTTTTTTATGTGCAGGTTAATACGGCGACGCTTTTAGGTTAATTTCT
CGAACTTTTGTACCCGTAAACATCTACACATAGTATAATGACTTTATTTG
TTTGACCATCATCCAGCATTAAAGCTCTGAGATATGACTCAATAAAGGTC
AAAGTGCTCACATGTTCACCGTTACAAACTTCGGGTAGAGAAAGCCGCTT
CACACTTTTTCGGCTGACCGGGCCATCATCACCATCATCCCCTAGGGACA
AAATCCTAACTCTAGGCAAGAATATTctttttacatcaaaatttttagaa
caaTTATGGACTACGGAAGAATTGCTAAGATAGCCGCTGGAGTTGCTGGC
CTATCATTTCTTGGGTACTGCATTTACTTTgacagaaaaagaagaagtga
tcctcttttcaagcaaaaactcAAAGAAAGAAGGGAGAGAGCCAGAAGAA
ATGcatcaaattcaaagaaaaaattgAACATACCAgatttgaaagatcaa
aatgcCATTCAACAATTTTTCCTTGCTTCTGTTGAAGAAGGAGAAAGATA
TTTGGCCATGCAAGATTACGAAAACTGTGTCAATAGCCTAACACAAGCCA
TCGCTGTATGTGGTCAACCTCAGCAATTACTTCAAGTCTTCAGAACTACG
CTACCTCCTCAAGTTTTCCAAATGTTGTTAGCAAACCTTGCAGCATTAGG
TGAAAATCAACCTGCTGGTGCAAGTGGTATGAATGTTGCAAGTGGAATGA
GCGTTGGTGCTCCTATGGGTGTAAGTAGCTTTTATAACTACTTTAATTAG
GCAGTCAAAGTATATAAAAGAAATGG Run BLAST on NCBI protein sequence of TCONS_00062985-protein >TCONS_00062985-protein ID=TCONS_00062985-protein|Name=TCONS_00062985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MDYGRIAKIAAGVAGLSFLGYCIYFDRKRRSDPLFKQKLKERRERARRNA
SNSKKKLNIPDLKDQNAIQQFFLASVEEGERYLAMQDYENCVNSLTQAIA
VCGQPQQLLQVFRTTLPPQVFQMLLANLAALGENQPAGASGMNVASGMSV
GAPMGVSSFYNYFN Run BLAST on NCBI transcript from alignment at scaffold_375:321689..330343- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062985 ID=TCONS_00062985|Name=TCONS_00062985|organism=Clytia hemisphaerica|type=transcript|length=8655bp|location=Sequence derived from alignment at scaffold_375:321689..330343- (Clytia hemisphaerica)
CCAGTCCAGTTCACTGATGAATCCATCTTTCTGTCTGATTGTTTATGGCT
ATGGTGTGGTGATGACGCTTTTGTTTGGCAGTTCTGCCTGGTAACTTCGT
CTGGCAGTCTGAAGTCTTTCTTAACAAATCTGTTTTGTTTACATTTTTGA
TCACTTTTTTATGTGCAGGTTAATACGGCGACGCTTTTAGGTTAATTTCT
CGAACTTTTGTACCCGTAAACATCTACACATAGTATAATGACTTTATTTG
TTTGACCATCATCCAGCATTAAAGCTCTGAGATATGACTCAATAAAGGTC
AAAGTGCTCACATGTTCACCGTTACAAACTTCGGGTAGAGAAAGCCGCTT
CACACTTTTTCGGCTGACCGGGCCATCATCACCATCATCCCCTAGGGACA
AAATCCTAACTCTAGGCAAGAATATTCTTTTTACATCAAAATTTTTAGAA
CAATTATGGACTACGGAAGAATTGCTAAGATAGCCGCTGGAGTTGCTGGC
CTATCATTTCTTGGGTACTGCATTTACTTTGACAGAAAAAGAAGAAGTGA
TCCTCTTTTCAAGCAAAAACTCAAAGAAAGTAAGTAGTTTCTTTTTAGGT
AATAAAGCCTACACCACAAGCTGTTTCTTGCGCCATTTCTGCAACTTTCA
AAATTGTTTCCATATCGAAGTCTAAACTTAAACTCCTATATCAGGATTAG
AAACTAGGCTAGTCTTACCTCTTATCTTTCCCTCCTTGCTTGACAACAAA
TACAATGCTGACAAGTTGACACAACACATGTGTACATGTACATTGACAAG
TAATCCCTGAGAGAAGTTTTTATAGAAATCTGCAACAAAAACGAAAGTGG
TCTATCTCTTCTACTGATTGCTTCCCAGAGCGCTCCTTTGCTTGCAGCCG
TTTATCAAATTTCCACCAATGATAGGGTGCGCACTCGTCGGGATTTTTTG
CGCGGAACGAGGAAGAATTTACAAAAATGAACTTCAAGGCATTAGTACTT
ACCTTTAAATCATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTTCCAGCTCATTATCGATAAGCTAAAGT
TTAACAGTCATCGGGCCGATTTTCAGACCGCGCCAGCAAAACTTCTCACG
CCCCGCCACGTGGAAGACTAGATTTCATCCGCCATTTTTGGCGCGATTTT
GGTGCTTCCGAAAATTATTTCTTGCTGGCCTGGTGTAAGGAGGCGATTCT
TTGAAAAGGTGGTTTTTTTGTGGTTTGAAAATGGAATAACTTTGGAACTA
CTTAACCAATTTTAACAAATGACCCCTCATTTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCAAATAAAATTAGTTTG
GTTTCTAAAAATTGAGGGGAAAATTTTGGCCTGTCCACCCTACCAATGGT
GTGGCGGGTAGACAGGAGACCCGTCGTGTGTTTTTTTATAATATGATGTA
CACAAGACGGGTTCGAGCTGTGAGTCCAATATTGGACTCACATTTTTTAC
AGTGGGAAATTCGAATTTAGCGCTGTCCTCACTTACTAAGATAAAAAACA
AATTTCGGAAGTTGCACTTTCTCTAAGAAAGTGTGACCAGTAAAAGAATA
ACAAAATTTGATTGGCTACGTTTTCAACCGTTATTAGGATCTGAGAAATT
CAAACTCTCAGCCTATACCATGCTATACATTTCGCCATCAGTTTATCAAA
GAAGAAATCATAGCACGGATTCCCAGGCTATGTGGCGGGGTGTGGGGAGT
TTTGCCGGTGCGTGGGGAGTTTTGCCGGTGCGGTCTGAAAATTGGCCCAA
AAACAAATTTCACCACTAGAAAGCTGAAATCATCAGCTTTCAGATGGATG
CTCTTAGATCGGATGGCCAAAAGTTACCTTCATTTTTTTATTTTATTTTT
TTATCCACGGATCGTTGATAGTCACCTTTCCGGGGGTTTTGTTGTTTGGA
ATTGCTTAGGTCAGGATTGCTAGTAACGGCTTGTCACTGTGCCGGGTGCA
TACTCGGCACCTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTATAATAATATTACCCCCGTCTTTTGCCAGTTCGGTATA
ATATGTTATGAATTGCGTGATTTTGCTGTGCGGCGATGGCTCAACGGATA
GAGCACTGGTTTCCGAACCTGATGGTCTTTCTTTGGTGGTGGTTCGAATC
CCACTCTGTGCGAAAATTAGACTGGTCGAAATTGATGGACAAATGATTGA
CAGGTATGAAAACTCAGTCAGAAATGAGAAACTAAGTCTCAGAAACTCAG
ACAGTCAGAAAAGAGAAAAATAGGATTAGAGATAGGAAAGAAAAGAAGGT
GACGATTGACCATCCGATATAACATCTACCCTTTCAGATGGTGTATGGCG
CTTAAAAATGAAAAAATCTGCAATCTTGTTAAAAAATCACAATTTCTTCT
ATTTTTCGAAATTCCAGACAGCCTGTAGATTTTCAAATAAAGCGTATTGT
GATAGATTTTAGCCTAATCTTACCCTGGGTTTACTAAAAAACCACAATTG
AAAAGATGAACCAGCTCAATAGCGACAGCCATTTGTTTACATAAAACATC
AATATCTATGGAAAGAAAATAGATACCTGGATGCAGTTCTTTTTACTTGT
TTCCCTGATAATTCCTGATTGATTTAAAAAAAAGAATGAACAGATATGGA
TGATTTAAAGGTAAGTACTACCATGAGTGGTCATAAATCCGACAGCCCTG
CCTAAATCCGATCCCCCAAATAACTGCTATGAAAAAAAATTACTTGTTCA
CAAACATTTCCTCTCCAAGTTGAACAAAAAACTATTGCAAAAACTCTCGA
AACAAAACATCTAACAAGATGACTATAATGTCAAGATGTCGTCAATTAAT
GTGATCAAAAGTGTGAGTTGTAAAAATAATTACCTCTATTATTCTACTAT
TCTGAATCTGTTGCTCGTGTTTAAAACATTAACAATTTTGTAATAAAAAA
ATTATGTTTTGTATAAGAAGCAATTATTGTTATTTGGTTCAATTCGTTCA
GTGTATCAAATCTTTCAAGCTTAGTTGACACTTTGGTATCTTCATTGTAT
CACAGCGAAAGATTTGTTTTTATTTTAGTTTGTATCTTTAAACGACCCCA
TCGGATTTAGGCAGGGCTGTCTGATTTAGGACCACTCAAGGTAATGCATT
GAAGTTCAATTCTTCCTCGTTCCGCGCAAAAAATCCCGACGAGTGCGCAC
CCTACCAATGAGGTTGCCGCATTTCAAACGGCCCTTCTTTTTGGCACCCG
TGGCCTTTCAGTGCCTTTCACGACGGGCGGCCGTAAAATCCCACCCTTCA
TATATTTGTTTCAATCCGTAATCCGTTAAAAGGACCCTCCCGGCGCTCCG
GAAACGTCCATAGCAAAAACAGAACATGTTAAAAATCACTTGCTCCGGAA
GCACCAGAAGAGCTCCGGAACTTTCCGGAGAGAAAAATAGTGTTTTTTCA
GCTGCTCCGGAAAACTCAAGAAAACTCCGGAGCGCCGGGAGGGTCCTGAG
TTAGATTGGGTCAAGTTGAACATTTTACAAGAATTTTTGTCATTGGATTG
GTCGTTAACTATTCAAACAAAAACTTTTATTATATTTTTCTAAAGAATGC
GTCATTTCTATTGTTTTGAATAACCAATTATGCGAGCATCTTATAAAAAC
CTCAACACAACTGCCAGTAGTATATCTAGGAGCATGAATCCGTAGTGGGT
GCCAGCAGCCTTATANTGCGTCATCTCTATTGTTTTGAGTAACCAATTAT
GTGAGCATCTTATAAAAACTTCAACACAACTGGTTAGATTGTCAACAAAG
TACCGTAAAAAATCATTGAATAAAAGAAGAACTTAAAATCTTAAATATTT
TCATTTTGAAGAATAGGTGCAAAAAAAGTGATTCATAGAAAATTTTCATT
TTTCATTGCATTAAATCGAAATAGGGGATTTGGAAAATTTTCTATGTTTA
GTTTTTTGCACAATAAACCCCTGTAACTATGGGCGAACACCCCGTTGCTA
AGATGTTGGCTTGAAATCAAAAATGAAACCACTCAAAACGAAAGTATAAT
CGGCCTGTACTCGAAATCCTGTAATCTTGATATACGAGTTTAAGTGTATA
CTGCATATACTGTTTAGGTATCAAAACTTATTTCAGTTAGGAACATTTGG
CGAGTTTCTGTACACGACCGCAATAAGCACACGTATAAGCACACTGCTTT
TAATTGGCTGAAATTTGTTTTCGCTTCAGAAAAACTTTTTAAAACTTTCA
GCAATGATTGAACTGTTACAATGAAGATTATCCAGCGCAATTTTTATCTT
CTTACTTTCTCCATCTTAATTGAAGCACGAGGTTTACTGAAGTTAAGCAC
ATAAGATATTCTTATACTTACTGATATTCACTGAAACATCGTTCATTGTG
CACTGCGGTGGAGTGCATGATGTAACTCACACGGCAACTAACTCGCCTTC
TGTTAGAAGATCATATTGGGCGTTTTGGTATTACCACCCTTAAAGCAGCG
GGCTCTTTTTGCAACTCTTTCCACCATTTTAGATGGCCTTAACAATAGAT
CCAAAGCAAAAGGGCACCATAATCTTGGAAGATAATTTGTTTTGGTCTCC
GGCTTTAGGAAGTAGCAATGTTTTTGGTTGTTTACAAGTGTCATGTAGTT
TTTGCTGGCTTATAGAATGGCAGGATCCTGGATGGTTTCCCTGACAGTCA
AGAACAAGTGCAAATCAGGATACCTTTGGCAATCTCGAAATGCAGACACA
TAAATAATTTACATTTTCTAATTATAAGGACAAAGACTAATCAATATCCT
AACTGTTTTCTTTTTGTATTATACTACATGTTTTTTTATGATATTTAATT
CCCAGGTCAATTATATCTAACTTTTTGTAATTTATATAAAAAGGAATTTT
GTTCATCTAGTCTTGTACAGCTAATTGTATTAACATGAAGTTGAAGTACT
GTGAAGCAAATTGTGTAATTTTTTTCTGAAAATTGTAAAGTACACTTACA
AATATCAATACAGCAATATGTCAGATCTAACCAAATTAATAATCAGCACT
GTCACCTAATACGTAATAGTTATCTGAAAGTTGTGAGTACAATATGATAA
ATATTTTACAAGTTCGGAGATTTTTCCATACTACTGTACATATGGAAAAT
CCAGAACGAGTGAAGTATTTCCATATTGTACTCCTAGCAAATGTCTGATA
ACTGTTTGTCGGTGACCCAAAAAATGCACTTTTTGTGTTGGAAAAAAGCG
CAGGGCAGTTTTGTAGCAAAGTGACGTTAGGTTGCTGCTACTGCTACAAT
GCAACAACATCTTTTTGTCAATTTATATTTTGTAAAATACGAGATATATT
GTACTCTTTTTAACCAATCAGATTGCAGATATTTTTTGGATTGACGATAA
AGTTTCCTTTGTCTGAAATATTGACAAAAAAGTTGATGCAATCAGCTTCG
AAATTTGACGTTTCGTTTAATTTAACCACTTCTTCAAATAATACCTTAAT
CCCATTATTTTTTGCTTCATCTAATTGCTTTTGTTCATTTTGTTTAATTT
CATCACATTTCCTTTTTGTAATTCAGCTGCAAAAGCTGATTGAAAAACTA
ATTTAAAAACGTTTTCTGTTTTTAGGAAGGGAGAGAGCCAGAAGAAATGC
ATCAAATTCAAAGAAAAAATTGGTGAGATTGATTACTTTTTTGTAAATGT
AATAACAGGAAATCGCAAGAATTTAGTACTCTAAATGCTTGCCTGAATAT
TTCTTGACTAAAGAAAAACATTTAAAAAGACATATTTCATAATTGTTTTA
TTGACATCATAAATACATTGGTCAGTTTCTCAACTACTAACCTATGTAAA
GCCTTAGAATGAGCTATATCCCTATTATTTGGAAGTATTCTAAATTTCAC
AAAAAAATGGATGGGGAGCAAACAATCCAAAACCAATTTTGATTTAAATA
TACAGCCCAAATATCTAGAAATCATCAACCAGACCTATCCAAATTATTTA
CCTGCCGTTCCCAGTAACATTTCAGGTTCCAAATGAGGTGATATGGGCCC
AAGCTAACTGAAAGATTTTGATGAAAACATGATCGTACCAAAAGAAGTGT
TGAGAAAAAAAATACAATATATGATTTCTCCACATAACTTTAGAAAATCG
AATTCTGAAAAAAGGGCATTCAAGACGTCATCAACATTACAAACCGTTAA
CTTATTATAAGTGAATTTTCAAATTTTGGTTCTGACCTTTTTCTATATGT
TCAATAATATCATAGCTTCAGCCAGGTTTCTAGCTCCCCCCCCCCCCCCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCC
CCCCCCCCCCCAACAAAGTAAGGTCCCCCAACAATTTAGCTCCCCCCCAA
AAAAATTGCCATGTGCAGGTCCCCTAACACTTCAGGTCCCAAGATAAACA
AAAACAAAAACATTGTTCTCTCGTCCGCGTAGAGAGAAGTCAATAAAAAA
TATATGCGAGTACAGTACTGATAAATGAAAACTAAATCTTACTTGTATTA
ATATTTATGTTTACAAATCTTTTGCTTTTTATATTTGATTATCTAGGCTC
CCCCTACAATCTAGATCCCCCCAAATATTTTGGTAATTTTAGCCCCCAGG
CTCTTTAAAGGCCAAAATATTTCTTAAAATAAAGATAATACCCTTGCATT
GAAGCTATAAAGTAACGTCAATATAGTTCAGTTATTTGAATGCAGAAAAT
AATTTGCTTTTCGAGTAAAGACACACGGAAAGCTTTTTTAAAACATTCAT
CAACCTGTTCACCTGTTCGGTAAAATATACCCCTCATATATCATAAACAC
AAATACGGGGTATATCTTGGTCAGGAATTCATACACTGTACCTATCCCCT
ATATCAAAATCAATTTGAGGATGCACACAACACACCAACAAGGCCTCATC
ACATATATTTAAGGAAAAGTAGATCTAGAGATCTCTGTGCACCTGGTTCC
ACCTACATTAAGCAGTGGTACCATTAGGATACTTTTTTTGAAAAACTTTT
TTTTTGAGAAACTGCCTCCAGGGTTTATAAAACTCATCTCATCAAAATAA
CTTACAGTGTTCAAAGTTCTTCCGTCTCAGACGGATTTCCTTCTCAGCGA
AGTTTAAAAAGAGGCATTTCCATCTCAAAATTCACTGAAATTCAATCACA
TTTGAGTAATCTGGCCTATTTTGTTTTGTAATATCCCATTTTCCGTCTGA
GATGAAAAGCTCTGCTTTGACCACTGAACTTAGGTTTAACTTGTGTTTGT
ATTATATTAATTTGAAAGAATTTTCTTTATTTAACAACACTTGATGTATT
TGACTTAGCATGGTCCTGGTGAGCGTCTATTTGATTATGAGTGTATTATT
TTTAGAACATACCAGATTTGAAAGATCAAAATGCCATTCAACAATTTTTC
CTTGCTTCTGTTGAAGAAGGAGAAAGATATTTGGCCATGCAAGATTACGA
AAACTGTGTCAATAGCCTAACACAAGCCATCGCTGTATGTGGTCAACCTC
AGCAATTACTTCAAGTCTTCAGAACTACGCTACCTCCTCAAGTTTTCCAA
ATGTTGTTAGCAAACCTTGCAGCATTAGGTGAAAATCAACCTGCTGGTGC
AAGTGGTATGAATGTTGCAAGTGGAATGAGCGTTGGTGCTCCTATGGGTG
TAAGTAGCTTTTATAACTACTTTAATTAGGCAGTCAAAGTATATAAAAGA
AATGG Coding sequence (CDS) from alignment at scaffold_375:321689..330343- >TCONS_00062985 ID=TCONS_00062985|Name=TCONS_00062985|organism=Clytia hemisphaerica|type=CDS|length=1485bp|location=Sequence derived from alignment at scaffold_375:321689..330343- (Clytia hemisphaerica)
AACATACCAGATTTGAAAGATCAAAATGCCATTCAACAATTTTTCCTTGC
TTCTGTTGAAGAAGGAGAAAGATATTTGGCCATGCAAGATTACGAAAACT
GTGTCAATAGCCTAACACAAGCCATCGCTGTATGTGGTCAACCTCAGCAA
TTACTTCAAGTCTTCAGAACTACGCTACCTCCTCAAGTTTTCCAAATGTT
GTTAGCAAACCTTGCAGCATTAGGTGAAAATCAACCTGCTGGTGCAAGTG
GTATGAATGTTGCAAGTGGAATGAGCGTTGGTGCTCCTATGGGTGTAAGT
AGCTTTTATAACTACTTTAATTAGGAAGGGAGAGAGCCAGAAGAAATGCA
TCAAATTCAAAGAAAAAATTGATGGACTACGGAAGAATTGCTAAGATAGC
CGCTGGAGTTGCTGGCCTATCATTTCTTGGGTACTGCATTTACTTTGACA
GAAAAAGAAGAAGTGATCCTCTTTTCAAGCAAAAACTCAAAGAAAAACAT
ACCAGATTTGAAAGATCAAAATGCCATTCAACAATTTTTCCTTGCTTCTG
TTGAAGAAGGAGAAAGATATTTGGCCATGCAAGATTACGAAAACTGTGTC
AATAGCCTAACACAAGCCATCGCTGTATGTGGTCAACCTCAGCAATTACT
TCAAGTCTTCAGAACTACGCTACCTCCTCAAGTTTTCCAAATGTTGTTAG
CAAACCTTGCAGCATTAGGTGAAAATCAACCTGCTGGTGCAAGTGGTATG
AATGTTGCAAGTGGAATGAGCGTTGGTGCTCCTATGGGTGTAAGTAGCTT
TTATAACTACTTTAATTAGGAAGGGAGAGAGCCAGAAGAAATGCATCAAA
TTCAAAGAAAAAATTGATGGACTACGGAAGAATTGCTAAGATAGCCGCTG
GAGTTGCTGGCCTATCATTTCTTGGGTACTGCATTTACTTTGACAGAAAA
AGAAGAAGTGATCCTCTTTTCAAGCAAAAACTCAAAGAAAAACATACCAG
ATTTGAAAGATCAAAATGCCATTCAACAATTTTTCCTTGCTTCTGTTGAA
GAAGGAGAAAGATATTTGGCCATGCAAGATTACGAAAACTGTGTCAATAG
CCTAACACAAGCCATCGCTGTATGTGGTCAACCTCAGCAATTACTTCAAG
TCTTCAGAACTACGCTACCTCCTCAAGTTTTCCAAATGTTGTTAGCAAAC
CTTGCAGCATTAGGTGAAAATCAACCTGCTGGTGCAAGTGGTATGAATGT
TGCAAGTGGAATGAGCGTTGGTGCTCCTATGGGTGTAAGTAGCTTTTATA
ACTACTTTAATTAGGAAGGGAGAGAGCCAGAAGAAATGCATCAAATTCAA
AGAAAAAATTGATGGACTACGGAAGAATTGCTAAGATAGCCGCTGGAGTT
GCTGGCCTATCATTTCTTGGGTACTGCATTTACTTTGACAGAAAAAGAAG
AAGTGATCCTCTTTTCAAGCAAAAACTCAAAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062985-exon-scaffold_375-1575043694:329765..330343 | TCONS_00062985-exon-scaffold_375-1575043694:329765..330343 | Clytia hemisphaerica | exon |
| TCONS_00062985-exon-scaffold_375-1575043694:323922..323968 | TCONS_00062985-exon-scaffold_375-1575043694:323922..323968 | Clytia hemisphaerica | exon |
| TCONS_00062985-exon-scaffold_375-1575043694:321689..322038 | TCONS_00062985-exon-scaffold_375-1575043694:321689..322038 | Clytia hemisphaerica | exon |
| TCONS_00062985-exon-scaffold_375-1510915933:329765..330343 | TCONS_00062985-exon-scaffold_375-1510915933:329765..330343 | Clytia hemisphaerica | exon |
| TCONS_00062985-exon-scaffold_375-1510915933:323922..323968 | TCONS_00062985-exon-scaffold_375-1510915933:323922..323968 | Clytia hemisphaerica | exon |
| TCONS_00062985-exon-scaffold_375-1510915933:321689..322038 | TCONS_00062985-exon-scaffold_375-1510915933:321689..322038 | Clytia hemisphaerica | exon |
| TCONS_00062985-exon-scaffold_375-1491911889:329765..330343 | TCONS_00062985-exon-scaffold_375-1491911889:329765..330343 | Clytia hemisphaerica | exon |
| TCONS_00062985-exon-scaffold_375-1491911889:323922..323968 | TCONS_00062985-exon-scaffold_375-1491911889:323922..323968 | Clytia hemisphaerica | exon |
| TCONS_00062985-exon-scaffold_375-1491911889:321689..322038 | TCONS_00062985-exon-scaffold_375-1491911889:321689..322038 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_375 | supercontig | scaffold_375:321689..330343 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005742 | mitochondrial outer membrane translocase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006605 | protein targeting |
| GO:0006886 | intracellular protein transport |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006886 |
intracellular protein transport |
| biological_process |
GO:0006605 |
protein targeting |
| cellular_component |
GO:0005742 |
mitochondrial outer membrane translocase complex |
Blast
BLAST of TCONS_00062985 vs. Swiss-Prot (Human)
Match: TOM20 (Mitochondrial import receptor subunit TOM20 homolog OS=Homo sapiens GN=TOMM20 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 8.999e-30 Identity = 73/130 (56.15%), Postives = 91/130 (70.00%), Query Frame = 3
Query: 465 GRIAKIAAGVAGLSFLGYCIYFDRKRRSDPLFKQKLXXXXXXXXXXXXXXXKKLNIPDLKDQNAIQQFFLASVEEGERYLAMQDYENCVNSLTQAIAVCGQPQQLLQVFRTTLPPQVFQMLLANLAALGE 854
GR + IAAGV G F+GYCIYFDRKRRSDP FK +L+ERR++ + + +PDLKD A+Q+FFL ++ GE LA +YE V+ LT AIAVCGQPQQLLQV + TLPP VFQMLL L + +
Sbjct: 3 GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLS-KLPDLKDAEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLPTISQ 131
The following BLAST results are available for this feature:
|
