TCONS_00069689 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069689
Unique NameTCONS_00069689
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length804

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069689 ID=TCONS_00069689|Name=TCONS_00069689|organism=Clytia hemisphaerica|type=transcript|length=804bp
TAGGAAATGTCAGCCAAAGTACAACACAGATTGAGTTTACGATATCCCCT
TATGAGCGGATTTCAGgaACGAGTCACAGAGGAGCAGATAGAGGaGTTTC
GTGACGCGTTTATGGCTTTCGATAAAGATGGGAATGGTTTTATTACAACA
AAAGAATTGGCCAAAATTCTAAGATCACTTGGCTTAAATCCTACAGAAAA
AGAAATATGCAAGCTTGTCAATGAAGTAGATTTTGATGGCAACGGAAAAA
TCGATTTTGTGGAGTTTGTAAATATGATGCTATTGAACGGTGATCAGCTT
GTGTGGAATGACAAAGACTTGTTGGAGGCTTTTCACGTCTTCGATTCAGA
CAATAAAGGTTATATAATGGCAGCAGAGCTGAAATACGTGTTGTCACAGA
TGGACGACGAGAAAATTCGAATTGAGGAACTTCAAGACATGATGCAAGCA
TCTCAGATCGATCAAAAccgaaaaatcaatttcaacgAGTTCAAAAACCT
AGCAAAACCTGACCTGAAGATCCATTCACATGCGTTggcacaacaacaac
aacataaccaaaacaaacaaagtcTAAGAGCGCTTCGATTCTTGACTTAG
ATACTTTGAGTATGGTGTACATATTATGGGAAAAATTATAATACTGCATC
ATCCAAATTAATCAAAACCGATAATTTAGTCCATTATATTTTCTTTGTAT
GAATTTGTAAGATATTTCAAAGCAGTAACAATTGAAGATTgacctttaaa
aatacacgattcaACACAGTCGCCTAATAATGTTTGCTGTAAAAATGATC
AAAc
Run BLAST on NCBI

protein sequence of TCONS_00069689-protein

>TCONS_00069689-protein ID=TCONS_00069689-protein|Name=TCONS_00069689-protein|organism=Clytia hemisphaerica|type=polypeptide|length=197bp
MSAKVQHRLSLRYPLMSGFQERVTEEQIEEFRDAFMAFDKDGNGFITTKE
LAKILRSLGLNPTEKEICKLVNEVDFDGNGKIDFVEFVNMMLLNGDQLVW
NDKDLLEAFHVFDSDNKGYIMAAELKYVLSQMDDEKIRIEELQDMMQASQ
IDQNRKINFNEFKNLAKPDLKIHSHALAQQQQHNQNKQSLRALRFLT
Run BLAST on NCBI

transcript from alignment at scaffold_506:223160..233350+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069689 ID=TCONS_00069689|Name=TCONS_00069689|organism=Clytia hemisphaerica|type=transcript|length=10191bp|location=Sequence derived from alignment at scaffold_506:223160..233350+ (Clytia hemisphaerica)
TAGGAAATGTCAGCCAAAGTACAACACAGATTGAGTTTACGATATCCCCT
TATGAGCGGATTTCAGGTATGCACTTGTTCTGGGTCACATAGTCAAGCTT
GAATGCTTTGCAAGCGATCAGTATTCGATTTCAGCTCAAAACATTTCATG
CTTTGTAAGTGAACGTAAGTATTCGCTGAAACCTTCATACCacgaattca
tgatatgcaccattgcaatgtcttccagcACGGATTcagcagctgattgg
ttgtaacgTGTGACGTATTggctgattttacgtcacttacaaccaatcag
ctattgggtccgtgatgtaatgtccgaagacattgcaatggtgcatatct
tGAATAGTCAATTAACAACGTCTACAATGTTGCTTGCTAGAATGACACTG
CAGGTTTTTCGCCGCTCAAACCTACGAAATGGGTTTGACTGGGGTTACTT
TTGTAACAGATACGCAAAACAGcctctttttttacttttttacctCGTAA
AATTCTTTTCGTGCTATAACTAGTCGcgattattttttcgttttgaAAAT
CAACATGTACCTTTCAAGTTTGAGGTCAGTTTAAGaggatttatattttt
caatatttaaaaatgaaaaactttgattgaaaaaatataaagaaaaaaac
aaagaagttaAACATCCCTTAAATCCTGTGGGATAAAAATCTGTTTTGAC
CACAGATAGATATAtaactagccgtcacccggcgtcgcacccgccgagga
gtagataagctgaacgcatcataagccctttggataGTAAGTAAAGGGAA
TATTATGGACTGATTTATTCccaaagaacgaaaaattgcCACTTGAGACC
GATCAAAACTCGAAAAATCGCAAATGtcatgttttgtgacgtcatttggg
ccctaagtgacgtcatcgaaagggtaataaacttttcacctcactgaaag
tatttcttccctttttcaaagattctcttgatgatttccaATCCAATGAG
GGATCaatcattgcttaaatcctGCTCAAACTCCAGATATTGGATTTTCA
GGTttggatgacgtcatcggaaccAAAATGCCTCAGTTTGAATACATTTA
TTTCAGAAAATCTCTATATACCCAGGatatacccactcttaccccTGCCA
AATTGTTCTCTATTAAattcccgatccaatgaggggtcaaccatctcgTA
ACTCCTTttcaatctcgagatatcgtcTTGTTAAGTTTCTTAGCTATCTT
CCGTAAAAGCCCGGGCTATAAAATATACGGTCTATCACGTTGCTATGTGA
Acggatttaaaagaaaaatggcggattcccaatgtaaacaaaaacacaag
gaaccaaaatgtgtcacagattagaaaaagttttttttcctatttCCCTT
CCCGATtaaccattttactttttatatagaCATATAATGATTAACAACTG
AATACTTTAAAAGCAAGAAGCTAAGCTCTAAGGCCAAAACCATTTACTAC
ACAGACAACATGAATTTATTGAGGACAAAAAACTGGTACcgtataaaatg
aaaatatcagccGCTCAATACTATAAAGGAACCCAAAGAAATGGAAGATA
GGataatgtcaatatttttataatgagGTTTAGTGTTAATTAAAGAGGTG
CTAGTGATaaatttaatgtatataaatctgaatgaaattagaatgattca
ttttatcaTATGATGGTgtcaattagcctccgtctcggaagaggactggg
cccgaatttgcggacgttttcacagtttcactttcgttttcggctatacg
acagcgttttcaagcagaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNat
ttcatcagaaaaaacatttacaccaaagctccttattgatatgtgaaggc
taccaaaaatagcaatgtcctccatcagaacaactttaacataagggaca
atgACAGTCcagaagtctactttgttgaaaatttgcacaaaatacttaga
gaaaatggtactatggaagccaattctatactcctaaatgatagttgaaa
gatcagcagttgagaaggttgattaaaatagaaatcaaagcacacaataa
agtatacatatatatttgtccagaaagaactggcatgttgtttgctttgt
tttggtgtttaaaaatatgtacttatcagtcctaaaaaaatacaaattcg
attataatgagggcaatgagtctggttaaatgttactatatttacaagaa
aggattactgaaaaaatactactgtatatatgtactactgatgaactaaa
ctcaaaaactaaaactttaccataaatttacattacgacaatttaaaaat
ctatctttaatagcaacaaagaaaaaaacatggctcaaagttttaaaaac
agagctagtcagagcttcaatacAGTAGCTATAGagcagacactgcattg
gttactacaagacatactatccacacggttttttcgattcatgaaaaaaa
atagagtatttatcaaaaaaaggttctctttttttttggtaatcaattcc
aacaaacaacaatccaCAATCAATAtgacagttttttgaaaaccatccca
cagtgtaaagattatcaaccaactaaacccacaccgccaaaattgtaaaa
ataagtcaatataatttctatcaacaatttctcgtaaaatgtttttttcc
aacattctgataccaatcatggctggagccatcatgtgtagagtgactgt
gtggcatttcattgcttttaatgatcacaataccaaacatcaacaaacaa
aactgacgccaagccaaatctgtcgattaaaaatttccatgaaaattata
attgaaacttatctcgtaaaatgcttttttcaacattctggaggtgNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtcacatcg
tgtttatatggggtatcagaaagccaatccacaagaagagccatcttcct
ttattatggagtgttccaaaactattggtaggttatTTGGCAGTAAAGAA
ACCcatacagtttgttttattttgaagatttaacttgaaaacaaactgca
tctttccaggagaaactcatgtttcaacctgctacataacattggtcagt
cgggtctgctaataacatgtaatagttttattatagccgagcttgagaat
ccctaggcagaacttgtaacatgtattatgtgtataattatgtcagtcga
cttgaatcgtgatacattactcacatttcactggatgtattttcgctgtg
aaattatccgcaaaattttctgaccgcgttctgagacggaggctaataac
TATAACCTTTTCCTATTTAcaacataataaaaattatggaaaataaagtg
ttcttataaaataaagagtcggtcggtctaagagtgagtcggtcggtcgg
tctataaagtgagtcggtcggttggtctaaaaaagtgagtcggtcgatcA
GTCTAAAAAGTGAGACAGTCgctcggtctaaaaagtgaggcgGTCAATTG
GGCTacaaaagtgagtcggtcggtcggtctaaaaaagtgagtcggttggt
cggtctaaaaaagtgagtcggttggtcggtctaaaagtgagtcggtcggt
cggtctaaaaagtgagtggGTCAGTCGGTCTAAAACGtgagtgagtcggt
cggtcggtctaaaacgtgagtcggtcggtcggtctaaaaattgagtcggt
cAGTCGgcctaaaaagtgagtcggtcgctcggtctaaaaagtgagtcggt
cgctcggtctaaaaagtgagacGCTCGCTCGGTCTAcaaaagtgaggcgg
tcggttgCTCTACAAAGTGATGCGGTCGGTCTGtatacaaagtgaggcgg
tcggtcggtctacaaagtgagtcGGCCGGTCGGTCGTGGAAACGaacata
tttgtgattgccgccctACAAAGACTACCAAATTACTTGGATGTATTACC
ATGCAGCAAAAATATGCCACTCTCAATTTTCAAGAGGGCTAAAGTAAATG
TTTCCATTGGTCGGTCTttggtctttgtttattttgttaagaTGGTTGGT
TGCGATAAGCCCCATAATAATTTCTGAAGAGAACAACTGTACAAATCCAT
AACAAAATGTTCTCTATTTATAAGAAACAGGATACCATAACCATTAAACC
ATTCCCTATCCATGTAAACGATGACACCAGTGACCAGAGCAGAGAGACca
gatcaatcaatcaatattaagaaaccaaagaaagaaaaagcaaaatagcT
GTTGAGATTCTGGCTATTCaatgttttatttacttttacgaaaattacca
gtaaagtagaatttcgaaaacggagatacgcttccgaaccgcgcgacgtt
tcccgatcggcaaggaaccgTAGGCATGTTTTCCCGTGACGGTGTCAAAA
GAAACGTACTCCGTCTCAAAAAAAGAACACTGtactgttttcccgctcgg
agctcgatttaaaaataaacttggaaaaaaatccataatggccccccGCN
NNNNNNNNNNNNNcccgctcggagctcgatttaaaaataaacttggaaaa
aaatccataatggctcccccacggctcatagaaaattagacttttagtat
atagactaaaaaaaatgaaaattcaaactttAGTTCCCTCCTCTGGGATG
AAAAGggacaaaatttaaatttttctaaaaccaCACAAAACCTTAATAAC
TAACATTCTGGTCAAAATCTCGGAAATCCGATAACGGTTTCAAAGGGTAG
ATACACATAATAAAAGCCATATATAACCatggaaaaaaataagacattga
cacataacatttttaaaacacGAAGACTTCTAAAATGGTACGTATATGTT
TATGATTTTATACGCACTTTTTGAAGTGGAACACCACATGGCCCAATCCG
GCAAAATTTTTAGTTATCAAACGCTTGGTTAGGATATGGAACAATGGGAA
AAAGAATAAACCTTCATGTTTGTTTAGGGGTTAAACCTGTGAGGAAGAGT
AGCTGCAAATTGATCTTTTCGTCAACAGCGTGCGTTACATTTTTCGAGGA
CGGCATTTTGTCGGCTTGGAAAGTAATctatctttttttcttctttcagg
aACGAGTCACAGAGGAGCAGATAGAGGGTAAGACACATGGTTGATAGTCA
GGGTACTAAAAATCGAcatgtatcctggggtgggtggtgccaaattatta
cttttcatatAGTATCGGCCTGTGTACTATAATTAGGGTGTAGGGTTCAA
AATGATTCTTTGGTTTTTGGTACTTTTATGGGGTCCAAAATGGACACTTA
CACTAGTACACATACTTACTTACTCTCGTACCCTgaaacctccccccccc
cccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNccccccccccccccggggtagcCAATCGGAA
AAAGCTATTTtcagtggattaattttcgcaaaaCAGATACTTCCAAAAGA
CgattttaatcaaaattaatttaatcTAATTTTCTCGGGAGTTATCTACG
CGAATCAGTTCCTTTTTTCAActgttttctttcattttcctaggggtatT
GACAGAGCTCTTGGTTTTTCGcaagaattaaatttcgcgaattttcgaaa
aaaactcgCCAAAGACTCCCCCGGTAAATAAATCCATTTAAGCTGCAAAA
AtgtaaatatatatatttttttacagaGTTTCGTGACGCGTTTATGGCTT
TCGATAAAGATGGGAATGGTTTTATTACAACAAAAGAATTGGCCAAAATT
CTAAGATCACTTGGCTTAAATCCTACAGAAAAAGAAATATGCAAGCTTGT
CAATGAAGTAGATTTTGATGGTACGGATATGGTTCAatattccttaaaaa
tctgaatagaatattttttctaattaaaattttccaaaaatgaaagaaaa
aatacccccagatattcacccaaggattAATTGTGCCCATTTTCGAAGTC
TCTAGACTGCCCTTAAGTATTTGAGACACACCAAAAGAcgattctcagat
tctagctcaaacgaagtttaaaaaatttagtcTGCTTTGTCAAGTTAAAA
AGCCACTTTAACAAGCTGTAAAATTTCATTCGGCAAATTTTATAATGATA
ACACCCCCTTTATCTTCTATTTAGGCAACGGAAAAATCGATTTTGTGGAG
TTTGTAAATATGATGCTATTGAACGGTGATCAGCTTGTGTGGAATGACAA
AGACTTGTTGGAGGCTTTTCACGTCTTCGATTCAGACAATAAAGGTTAGT
CAGTCAGACCCAGTCAACTGAGGCTCTGggaaatatattctttaaaaaaa
aaaagaagtattgtttgtgattgatgttgcagagtgctcaatgaaaacca
gagccaagtaaaatattaaaatatatctttcatcacaaaaaattaaaaga
gtaCACTACTCCGATTTCGTGCTACTGCACTTTTCAAATgtacaaaataa
aattattttacttgATTGAAGACTGTAAAAAATACTtggggctagcttgc
tagggggATAAGTGTTGAATAATAGAACCggggcagagctgataggttAC
AAATATTTTAAGTTAAGTTAAAAGTCTATGCTGTGAGGAAGGTTTTGACC
CCTCTTATAAGGTTTTCCTTACCACCCCCCTGAAAAATACTGGGAGTCGG
ACCTCTCTGCATTCCATGTTTCGCCCATATAACATGATGAAGATGATATC
GAACACTGGAAGGCTGTCAGgattgataaccactacactactgagCCGAT
ATTTAATAATAAGTAAGCTTTTATACATACATAAACGTAAACATTttggt
tttgataaaaatatgatTCAGACCCAGTTAAAGAATAAGAAGAATGGTGT
AAATatcatgaaagaaaaaaacagatCTTTGGTAACCATTCTTTCCAATG
ACCAGACATAcatttgtctgtacacagacccagtatctacagcTAATTCC
AAAATTCATCGCCGTAGAGATGTCATTCATtgtcttttttgatttgagaT
TCTTCAAATCGACTGCTGCGATGAAGTGTTGgagagagaggggagacgat
aaGAGTTGTGTTGCTATTAAAAAATcgtacttcatcgcagaggtctccgt
acgggaatttttttattaaacagacaatgcgcacagagtgtacttaCAAA
GCGATagacgtgagatacactctggtacagagtagacATACATAGGTAAA
GATTTCCATATCAGCATAGGAGGGCAAAAAGCTCTCCCCATAATAAAATa
cattaaccctattagccccaagcttttttgactttggtatccccaggggg
gggtagaatctaccaccctcgattttttttgatctagaagagctatggtc
atgaaatttggtacagatgttctccatcatgaaacaaatttccaggaaga
aaaaaaaattgatgacgtcattcaaaaaccgatgacgtcatcacaaaatt
tccacttGTCGGAAAAAAGCTCGAATATATGGTTTACTAAACTGTCcatt
acaatcgaaccaataaagatatttagattatgtttaaagattcagaaaga
taaaaggttgttctttaacataattgccggttttgaaatttctgcgaaga
gtttttcttaaaatctatgctgaagatgagtaaaattttcaaaatttgat
gacgtcataaatgatgacgtcatcattttcaattttcttttttcaatttt
tcaaatttatattgtcaatgtctatcacgtgtcaaaatttgaaaatgatt
gaataaatagttcaaaagttatcagcactttaaaattttgagttttaagc
ggttttagctggattttatgtcatgtttcacaataaagccataaaacctg
atctgagcaacctatgaccctaaaattttgcacaagtactcttaataaga
ttttgttaaaagtcagaaagtttcaagttgtttaaaaaatttttctcaaa
gatattcacaaaagaactccagcgtggtagattctacccccccctggggc
taatagggttaaactgTATTTTTGATTATAAGTTGAATAACTAGATTCAA
ATAATAAGAGTTTCGAAGTGAAGAAAATTCCCTTTGGGCTTTGATTCAAA
TGACTAATACCTGATGTAATACCTCTGAAAATGACAATTCTATTTCCTAT
ATGTATGAAACAGGTTATATAATGGCAGCAGAGCTGAAATACGTGTTGTC
ACAGATGGACGACGAGAAAATTCGAATTGAGGAACTTCAAGACATGATGC
AAGCATCTCAGATCGATCAAAAccgaaaaatcaatttcaacgGTAAGATT
TCTATACAGTAAACTCATTTTACAAGTTCTttataataagaacaaactat
atacttagctttaaaaagttaagaacatccgaactCTTGAATTTTGGACG
ATGCATTTAGAGTTGCATGAGACAGGGATTTTTTTCTGAACCGATTATGT
TGACAAAACAGACTCGTTCAAATAAGTTACCTAAGGCAGATAGCGTGGAT
AGCCGGATTTTTATTTATACcaataattttcaagaaaattttcaCTTTGA
TTTTAGTTGATTTTGCAAGTCAGGGATACTAACTGGCGAGGAAACTCTCA
TGATATGGCAAAACAGACAACACCGACTTTTATTCCTGCTTTTATTAATC
TCTTATCTTTCTTATTATATACAGAGTTCAAAAACCTAGCAAAACCTGAC
CTGAAGATCCATTCACATGCGTTggcacaacaacaacaacataaccaaaa
caaacaaagtcTAAGAGCGCTTCGATTCTTGACTTAGATACTTTGAGTAT
GGTGTACATATTATGGGAAAAATTATAATACTGCATCATCCAAATTAATC
AAAACCGATAATTTAGTCCATTATATTTTCTTTGTATGAATTTGTAAGAT
ATTTCAAAGCAGTAACAATTGAAGATTgacctttaaaaatacacgattca
ACACAGTCGCCTAATAATGTTTGCTGTAAAAATGATCAAAc

Coding sequence (CDS) from alignment at scaffold_506:223160..233350+

>TCONS_00069689 ID=TCONS_00069689|Name=TCONS_00069689|organism=Clytia hemisphaerica|type=CDS|length=3564bp|location=Sequence derived from alignment at scaffold_506:223160..233350+ (Clytia hemisphaerica)
ATGTCAGCCAAAGTACAACACAGATTGAGTTTACGATATCCCCTTATGAG
CGGATTTCAGgaACGAGTCACAGAGGAGCAGATAGAGGaGTTTCGTGACG
CGTTTATGGCTTTCGATAAAGATGGGAATGGTTTTATTACAACAAAAGAA
TTGGCCAAAATTCTAAGATCACTTGGCTTAAATCCTACAGAAAAAGAAAT
ATGCAAGCTTGTCAATGAAGTAGATTTTGATGGCAACGGAAAAATCGATT
TTGTGGAGTTTGTAAATATGATGCTATTGAACGGTGATCAGCTTGTGTGG
AATGACAAAGACTTGTTGGAGGCTTTTCACGTCTTCGATTCAGACAATAA
AGGTTATATAATGGCAGCAGAGCTGAAATACGTGTTGTCACAGATGGACG
ACGAGAAAATTCGAATTGAGGAACTTCAAGACATGATGCAAGCATCTCAG
ATCGATCAAAAccgaaaaatcaatttcaacgAGTTCAAAAACCTAGCAAA
ACCTGACCTGAAGATCCATTCACATGCGTTggcacaacaacaacaacata
accaaaacaaacaaagtcTAAGAGCGCTTCGATTCTTGACTTAGATGTCA
GCCAAAGTACAACACAGATTGAGTTTACGATATCCCCTTATGAGCGGATT
TCAGgaACGAGTCACAGAGGAGCAGATAGAGGaGTTTCGTGACGCGTTTA
TGGCTTTCGATAAAGATGGGAATGGTTTTATTACAACAAAAGAATTGGCC
AAAATTCTAAGATCACTTGGCTTAAATCCTACAGAAAAAGAAATATGCAA
GCTTGTCAATGAAGTAGATTTTGATGGCAACGGAAAAATCGATTTTGTGG
AGTTTGTAAATATGATGCTATTGAACGGTGATCAGCTTGTGTGGAATGAC
AAAGACTTGTTGGAGGCTTTTCACGTCTTCGATTCAGACAATAAAGGTTA
TATAATGGCAGCAGAGCTGAAATACGTGTTGTCACAGATGGACGACGAGA
AAATTCGAATTGAGGAACTTCAAGACATGATGCAAGCATCTCAGATCGAT
CAAAAccgaaaaatcaatttcaacgAGTTCAAAAACCTAGCAAAACCTGA
CCTGAAGATCCATTCACATGCGTTggcacaacaacaacaacataaccaaa
acaaacaaagtcTAAGAGCGCTTCGATTCTTGACTTAGATGTCAGCCAAA
GTACAACACAGATTGAGTTTACGATATCCCCTTATGAGCGGATTTCAGga
ACGAGTCACAGAGGAGCAGATAGAGGaGTTTCGTGACGCGTTTATGGCTT
TCGATAAAGATGGGAATGGTTTTATTACAACAAAAGAATTGGCCAAAATT
CTAAGATCACTTGGCTTAAATCCTACAGAAAAAGAAATATGCAAGCTTGT
CAATGAAGTAGATTTTGATGGCAACGGAAAAATCGATTTTGTGGAGTTTG
TAAATATGATGCTATTGAACGGTGATCAGCTTGTGTGGAATGACAAAGAC
TTGTTGGAGGCTTTTCACGTCTTCGATTCAGACAATAAAGGTTATATAAT
GGCAGCAGAGCTGAAATACGTGTTGTCACAGATGGACGACGAGAAAATTC
GAATTGAGGAACTTCAAGACATGATGCAAGCATCTCAGATCGATCAAAAc
cgaaaaatcaatttcaacgAGTTCAAAAACCTAGCAAAACCTGACCTGAA
GATCCATTCACATGCGTTggcacaacaacaacaacataaccaaaacaaac
aaagtcTAAGAGCGCTTCGATTCTTGACTTAGATGTCAGCCAAAGTACAA
CACAGATTGAGTTTACGATATCCCCTTATGAGCGGATTTCAGgaACGAGT
CACAGAGGAGCAGATAGAGGaGTTTCGTGACGCGTTTATGGCTTTCGATA
AAGATGGGAATGGTTTTATTACAACAAAAGAATTGGCCAAAATTCTAAGA
TCACTTGGCTTAAATCCTACAGAAAAAGAAATATGCAAGCTTGTCAATGA
AGTAGATTTTGATGGCAACGGAAAAATCGATTTTGTGGAGTTTGTAAATA
TGATGCTATTGAACGGTGATCAGCTTGTGTGGAATGACAAAGACTTGTTG
GAGGCTTTTCACGTCTTCGATTCAGACAATAAAGGTTATATAATGGCAGC
AGAGCTGAAATACGTGTTGTCACAGATGGACGACGAGAAAATTCGAATTG
AGGAACTTCAAGACATGATGCAAGCATCTCAGATCGATCAAAAccgaaaa
atcaatttcaacgAGTTCAAAAACCTAGCAAAACCTGACCTGAAGATCCA
TTCACATGCGTTggcacaacaacaacaacataaccaaaacaaacaaagtc
TAAGAGCGCTTCGATTCTTGACTTAGATGTCAGCCAAAGTACAACACAGA
TTGAGTTTACGATATCCCCTTATGAGCGGATTTCAGgaACGAGTCACAGA
GGAGCAGATAGAGGaGTTTCGTGACGCGTTTATGGCTTTCGATAAAGATG
GGAATGGTTTTATTACAACAAAAGAATTGGCCAAAATTCTAAGATCACTT
GGCTTAAATCCTACAGAAAAAGAAATATGCAAGCTTGTCAATGAAGTAGA
TTTTGATGGCAACGGAAAAATCGATTTTGTGGAGTTTGTAAATATGATGC
TATTGAACGGTGATCAGCTTGTGTGGAATGACAAAGACTTGTTGGAGGCT
TTTCACGTCTTCGATTCAGACAATAAAGGTTATATAATGGCAGCAGAGCT
GAAATACGTGTTGTCACAGATGGACGACGAGAAAATTCGAATTGAGGAAC
TTCAAGACATGATGCAAGCATCTCAGATCGATCAAAAccgaaaaatcaat
ttcaacgAGTTCAAAAACCTAGCAAAACCTGACCTGAAGATCCATTCACA
TGCGTTggcacaacaacaacaacataaccaaaacaaacaaagtcTAAGAG
CGCTTCGATTCTTGACTTAGATGTCAGCCAAAGTACAACACAGATTGAGT
TTACGATATCCCCTTATGAGCGGATTTCAGgaACGAGTCACAGAGGAGCA
GATAGAGGaGTTTCGTGACGCGTTTATGGCTTTCGATAAAGATGGGAATG
GTTTTATTACAACAAAAGAATTGGCCAAAATTCTAAGATCACTTGGCTTA
AATCCTACAGAAAAAGAAATATGCAAGCTTGTCAATGAAGTAGATTTTGA
TGGCAACGGAAAAATCGATTTTGTGGAGTTTGTAAATATGATGCTATTGA
ACGGTGATCAGCTTGTGTGGAATGACAAAGACTTGTTGGAGGCTTTTCAC
GTCTTCGATTCAGACAATAAAGGTTATATAATGGCAGCAGAGCTGAAATA
CGTGTTGTCACAGATGGACGACGAGAAAATTCGAATTGAGGAACTTCAAG
ACATGATGCAAGCATCTCAGATCGATCAAAAccgaaaaatcaatttcaac
gAGTTCAAAAACCTAGCAAAACCTGACCTGAAGATCCATTCACATGCGTT
ggcacaacaacaacaacataaccaaaacaaacaaagtcTAAGAGCGCTTC
GATTCTTGACTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043394XLOC_043394Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069689-proteinTCONS_00069689-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069689-exon-scaffold_506-1491911889:223160..223225TCONS_00069689-exon-scaffold_506-1491911889:223160..223225Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1510915933:223160..223225TCONS_00069689-exon-scaffold_506-1510915933:223160..223225Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1575043694:223160..223225TCONS_00069689-exon-scaffold_506-1575043694:223160..223225Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1491911889:228759..228786TCONS_00069689-exon-scaffold_506-1491911889:228759..228786Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1510915933:228759..228786TCONS_00069689-exon-scaffold_506-1510915933:228759..228786Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1575043694:228759..228786TCONS_00069689-exon-scaffold_506-1575043694:228759..228786Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1491911889:230036..230179TCONS_00069689-exon-scaffold_506-1491911889:230036..230179Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1510915933:230036..230179TCONS_00069689-exon-scaffold_506-1510915933:230036..230179Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1575043694:230036..230179TCONS_00069689-exon-scaffold_506-1575043694:230036..230179Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1491911889:230484..230603TCONS_00069689-exon-scaffold_506-1491911889:230484..230603Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1510915933:230484..230603TCONS_00069689-exon-scaffold_506-1510915933:230484..230603Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1575043694:230484..230603TCONS_00069689-exon-scaffold_506-1575043694:230484..230603Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1491911889:232523..232651TCONS_00069689-exon-scaffold_506-1491911889:232523..232651Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1510915933:232523..232651TCONS_00069689-exon-scaffold_506-1510915933:232523..232651Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1575043694:232523..232651TCONS_00069689-exon-scaffold_506-1575043694:232523..232651Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1491911889:233034..233350TCONS_00069689-exon-scaffold_506-1491911889:233034..233350Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1510915933:233034..233350TCONS_00069689-exon-scaffold_506-1510915933:233034..233350Clytia hemisphaericaexon
TCONS_00069689-exon-scaffold_506-1575043694:233034..233350TCONS_00069689-exon-scaffold_506-1575043694:233034..233350Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:223160..233350 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.178879	0	0	0.586564	0	0	0	0	0	0	0	0	0.158623	0	0	0.109004	5.55952	4.94932	0	0	25.8165	18.729	6.65322	8.83159	7.39079	7.08471	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
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BLAST of TCONS_00069689 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.699e-39
Identity = 70/142 (49.30%), Postives = 102/142 (71.83%), Query Frame = 1 
Query:   67 ERVTEEQIEEFRDAFMAFDKDGNGFITTKELAKILRSLGLNPTEKEICKLVNEVDFDGNGKIDFVEFVNMMLLNGDQLVWNDKDLLEAFHVFDSDNKGYIMAAELKYVLSQMDDEKIRIEELQDMMQASQIDQNRKINFNEF 492
            +++TEEQI EF++AF  FDKDG+G ITTKEL  ++RSLG NPTE E+  ++NEVD DGNG IDF EF+ MM         +++++ EAF VFD D  GYI AAEL++V++ +  EK+  EE+ +M++ + ID + ++N+ EF
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD-TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEF 142
The following BLAST results are available for this feature:
BLAST of TCONS_00069689 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.699e-3949.30Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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