XLOC_031122 (gene) - C. hemisphaerica

Overview
NameXLOC_031122
Unique NameXLOC_031122
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_15:418774..425813+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031122 ID=XLOC_031122|Name=XLOC_031122|organism=Clytia hemisphaerica|type=gene|length=7040bp|location=Sequence derived from alignment at scaffold_15:418774..425813+ (Clytia hemisphaerica)
TCTGGATTCgcgtttttgaaaataaaggtcTAAAGTAGCAATTTCTCTTT TTATCCCACTCTTCGTAGGGACTCCTCTTCGTAGGTTGAAGAGCGATTTC GAGACGTTCAAAACATTGGCTGATGAGCGAGCGAGGAAAAATTATTTAAG TACAAATTTTTGACAAGGAAATATTTGATGGAAAGTGACTAACAAAATAC TAACTTTCGAGGTTTACTTATTGGAGTATTTACTCTTTGGAGTTTATTGG AAATATGTTGCAGGTTCTGCTAATAAGACTTACTACACTATGTATATTGA TGTCACTATGTATAGCAAGTTCATACGAGGAAAAAACTGTTTACACACAA GCCTTGCTGACTGTTTCCTATTTTAAAGGAGGTAAAAAGCCTGACCCTAC CAAGGTTGCTGGTAAATATGCTAAAAGATCAGGCAAACAACAAGTTGAAG GTGTTTTATACTTTTCAAACACTATAAACTGGTGCGAtgaaaagtcagca aaaaagtataaatttccaaaagaaaaatggaTTGCCTTGATTCCAAGACA ACAGACAGAACCAAACAAAACATGTACACTTTCCCTTAAATTATTGACTG CAAAAAAGATGAACGCTTCAGGTGTTGTAGTATATAATAGCATTCCAGGT GAGGTGCCAGCTATTGAAGATGACACGCGTGATGTTATAACAGTTATGAT TGACAGGGAAGCTGGTAATGAATTAAGGAAACTTGTTTTAGATAGTTCTA TTACAGACATTAAATGTAAAGTAACAGTAGGTACTCATTACGTCGATCGC AGATGGAAAGTTAGCAGGACATCTGTCTTATTTGTTTTGGTATCATTCAT CTTGCTCATGTGCATATCACTTGCCTGGCTGGTATTTTACTATGTTCAAC GATTTAGACATATCTACAGAAATGATAGAAAAGAGGTTAACTGAATATTT TTACTCTTTTAACTTTAAGACAGTGTCTTATACGGTCCCTTAAGGTTAGG CCTTGATTTTACCCTAAAGTCAAAATAATTCTGCACATGGGTCGTTGTTT GAGGCCAGgtaaaatttccgggaaatggCCTATTCTGCGGTGTATGGATC TAGGTGGGTGTCTTCTCCCCACAGAATATTTTCTTGGGCAGTTGTTCTTA AAAtcagttttcaaggttggcccTTTCCGCATTATTATAATGATGTTATG TCTTAGTATATGTATATACTAAAGATTGGGCAAGGTCTTAGTATGCTATA TTAATATAAACAAGACTGGGGAAATCAAACTGACCAAAAGGGCAACAGCC TAATAATATTTTGCAATATGATATGTTATTATCTCTAGCTGGAATAAGGT CTATTGAACATAATCCCTGGTTTAACGTTTACTCTCACTCGAAGTACGGT CAATTTGGGGGCAGTTTTCGCAAAATTGATCCTTGTATGATTTAAAAACA AGCACTTGGATTAAAATgttattaatttttattttttgttttttatttta ctaatTAACCTTTCACTATCACAAAAAACGCCATCacaaactacacgttt ttttttttaagaaacacacttttaagaaacatgacgctcagaatgcctaa aaactaagaaacatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTCGTTCACAACTTTCCTGAAAAATCTTTGTGTCATTACCTATTTCCC TATCCTCATGTATAGCAAcgacagattttggaaaaattggagacataaat ttttcgcaaaaataagcatatgataAACATACTTCGAGCCTGAGTCTAAA ATATCTCTGATCATAACTGAGCTTGTTTcctaaaaaaaacataatatgct tataaaaaaacatttacatcTTTTTGATGACTTTGTCAGGTATTtattaa aatagtaaaaaaagtaattaaattaCTCACTGGCATCACTCAGTGATTTT TGTACTCAAATAATTGAATATTATCAAAGGCATTGAACTTATCGATAGAA ATCTTAAGGACTTATATGTGATTTATCTGTACAAAATAATTCAACTCACa ttgaaattcttttatttCGTTTTGCAGAAACAACTTCTCAGTGCTGCTAA GAAAGCAATTTCTAAGCTAAAGACAAGAGGATATCAAGAAAGCCCAAAAG AGGTAATTTTTACTAGACCCACACATACTGATATATAGTTTTGATTCAAA TGTAACAATACTGTTTTCGTAAATTAAGATTTTCAactaataaaattttc aatgtcTTTAATTAAAGGTCTTATCTTTCTTCGACCTTCTTGGAACTCTA AACTTACGCAATTTTTTTGCAGGATTTTACTTTTCCTGGTAAAGTTCATT AGTTAGATTACTAtatatgttaattttttttatgtcaTTAGGATTTAGAA GAATCATGTGCAGTCTGTTTAGAATGTTACAAAGAGGGGGAAACACTGCG CATTTTACCATGCAAACACGAGTTTCATAAAGCTTGTATCGACCCGTGGC TGCTGAACCATCGTACATGCCCGATGTGCAAAAGCAACATCTTGAAATCT CTTGGAGTGGTAAGACctgttcattttttttaaatcacgaCATCACGGCT TCCCAAGAATAATAAATACGTTTCTAAATACTTGTAACAATTTatgttgt tttgatgtttttattttgaatcaaTGCCAGccttatttttttgcaaatat tgtCGTCGAAGCACTTTAAATGTGTCTTCCGCTAGGAAAGTCCCTCTTct atatttgtttttgttttggtttgtaaTGTAAGCTGATACCGTACCTCTAT AGTGATATGTCACTTGATAAAGTGTAATTAGGTGCCAAACGTTTTCGAAG ATGCGTGGAAATCGGCATTATACTGATTTTTTTCCTGTTTCCTTTCTACT GCTTAGGCTTTCATTGGGCCAAAAAGAGGATCTTCTAAAATACATTCGTA GATCACTCTTTTGAAGCGCTATCTTTCGTTTTTCAACCAGTTTCAACCCT ATATGACTGAATATATTTTTGAGCAACCAATAATCAGACCGTTTAACGTC ATATTTTGTTTTTGTTCTTTTCAGGAGATGCCTGAGAACGAGACGAACGG TTCTGACGATAGATATGTTCGTGGGTTCGTGCCACCATCCACGACTACTA TAGAAGCCAGCCAATCCAACAATGGGGAGCCTTCAGTTGTTGTAGTGGTG CACGAGCAACAACAAGTCCCTCAAGCATGGGCTGAACCCTCCATTGCGCA ACCCAGCCCTGACAATCGATATTCAGGTACTTTCTTTTGTTGTTTACTCA TTGATTTGAACATGTAGGCCTTGTCTGTTTAAACGGGGTTTGGGACTGTG ATTACTTGATAGCTTTTTGTTTTCATTTGAAAGATAAATGTTATACAGTA TTTTGCATTATTGTGGTCTCTTATTTTATTCCAAGATTGAAACCTAATAT TTTTCAAAACACAGTTGAGGCTGGTTGAGATACTGTGTATCAACTGCAAG ATATGAGAAACGAGATTCTTTGAAAATATCAAAAAAGACGGCAGAGGTAA TAAAAAGAAGAGCTTTTTCTAATGAAACCTCTCTCGTTTTCTCTCCTTAG CTTCGTCGAGTTCAAGCGATACCGATTCTGATCGATCAACAGTCGCCCTC GTTTCTTTTGAACAACGGGTTTGAATAAATTTATGGTGCTGGCACAGTTT TTTTGTATTCTACTTAGAAAATTTCTCATAGCGTGgtgaatgtttttaat tttttttctaaccaACCTAATATGAGAGAGTACTTTGTACCACACAAAAG CGTTGATCGCTTGTTTCAGTTTTATCCTGTTGTGTTGGTGGGGCCATTTC CTTTGGCTTCAAAACTTTGATATGTATTGACTTTGAATGACGTAGAAGAG CCAATTTCTTAATCGCCTCTTCTCATTAGACACTAATCGAATTCCGGTTG TTTGAAATCACGAATTTCCGGGTCTGCCACCACACGGTGAAATATTCATC TGTGATAGTTGTTACTAAATGTGGATGGCGTTCTTTCNGGTCTGCCACCA CACGGTGAAATATTCATCTGTGATAGTTGTTACTAAATGTGGATGGCGTT CTTTCGCAACCAATACATTATGACATTTTACTCGATCATTCTTGACTCTG ATGTAATTATAAACAATGATCTGGTAAAACGATTTAGGAATTCCTATTTC TTTTGTTCGTTTTCGAACTGAAGAAAATTCGAAGAGTATTTCTTTTTTGA GAGTTGGCAAGGAGCTTTATGGACTGATGACAGGCTAAAGTTCGTACATA GTGTATGTGATTGAAAAGTATGGCAAACAGGTTTTGGCATAATCATGGTC GGGAAAACGAAGCTCGCTGTCAACTTAATAAAAACGACCTTTCTTTTGTG ATGTTGAAATGTTTAAAAGGTATTGCCAAAACTCGATTCGTTTTGCCTTN GAAGCTCGCTGTCAACTTAATAAAAACGACCTTTCTTTTGTGATGTTGAA ATGTTTAAAAGGTATTGCCAAAACTCGATTCGTTTTGCCTTGCTATGAAA CGAGTTGCAAAATTGGTAGAATATCATcgaaatttcatttgtttatacTG ATGTTTGTCTCATTTGTTTGTCTTACAAATCCAACCTTAAAAGGAGTTAA ATTAAAGAAATGTCTTTTTAGTAACAGCAATGTTTTACGCATATTTTAAT CCGgtaattttttgatattttaccgAGAGGTTTAGACAGAAGCTTATCGA ATTATGACTTTTTTGCGTACTTggtataaaaactttttaagatgAAAGTT ACCTATAAATTATTCAGTAACTTTTAACCCATTGAGAACATCCAGGTTTT TTAAGTAAGTTAAAGTTCTTTCAGAGGGATAATCATTTCTAGATAAAACT TTAGCGAGTCCGTGCTGGAAAAATCATGCCTTTAGAACGAActagtttgt ttatatttatattttttgtcttATTGTTTTTATCGTTTAGTTCTAAACGG TCTACATCAATCCTTAACCATAATCGCTATTTTACGCGATTTTTTCCAGA AACTTGTATTTTACTATACGTTCAACGGACGTTAACGTAATTAACGAAAC GATCCTTCTTTTCGACGATTCCTGTCcaatcaaaattaaaacataATACA CTTGATTGACTTGACGCCCCCGCACCAGTGTTTTTTGTTGTATTGGACCT TATCCATcctccccaaattttccaagaCCGCCTTTTCCCACGTTTATAGG TCACCTTAAAGTATACTAGATATAGAACCATTCTTGCTCCCACTACAAAT AGCGTCCAAAAAATATACCCGGGATTTTTTGCGTAATAAATTTGGTCGTC AATAATACTCCGATAATATAAGGtatattaattaattttttttctttttt gtaaatattaacgttgaattgttttaaaaattttcgacTAGATTTTTTGT CAGATAAAAGAAAGGTCGATAAAATCTCACACTTTTGTGTTTACaacttc aaatttttgcttcatccgttttaccaccctaaactcgatccaatattttt tttacacatttttctattgtctttaggtgcagaaaaaagactgggatggt tttaggttggtaaaacggacaaaaaaatgcccgcgcggctacggtcgaaa aggtgtataaaacACAAAAACTTTAATGTGTAGATGCGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048998TCONS_00048998Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048998-proteinTCONS_00048998-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:418774..425813 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RNF148RING finger protein 148 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.38 18.26 19.23 17.72 59.05 40.2 59.77 63.02 44.04 47.51 39.98 33.94 31.04 28.38 22.58 29.3 33.75 36.02 25.87 32.84 50.67 50.58 32.59 37.03 31.42 36.25 52.33 48.32 37.02 41.19