XLOC_031699 (gene) - C. hemisphaerica

Overview
NameXLOC_031699
Unique NameXLOC_031699
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:502049..508168-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031699 ID=XLOC_031699|Name=XLOC_031699|organism=Clytia hemisphaerica|type=gene|length=6120bp|location=Sequence derived from alignment at scaffold_167:502049..508168- (Clytia hemisphaerica)
TAAAAACTCAAATGTAGATAAAACCGAGGTTGCAGATGGAAAAGGATTGG AAGAATAGTACAATATTGTATTGTATCATTCTAATGGTATGCATTTTCTT TTGACAAACTAAAATAGTCTTGAAGAGAGAAATTTTGTCTGAAATAGATT TTACATTTCTGCTAGAATCATTAGTGTCAATCACTCAAAGTTTTCTTACT GTATGAGGTTTTTTCCATGCAGAACCTGTCAGATTATAATCTGGCAGGAT CCAGGTTTCACCATCAATGATCTCAATTTTCAGGATCCAATTTCTACTAA GAATTGGTATCTAACATGGGGTGTCCATTTTTCTTCGTTAAACGTCAAGA TTTGTTTTTGCTGTTTTTTTTGACAGGCTTGTACTGTAGCAGGATTTTCT CATACTTATTTTTAGTACCAATCCAAATGTTGCTTTTCGCTAAGATGTGA ATCAAACATACCACCTAATGTTCATGGCGTTCACCCGAGCATGTTAGTCG ACTCAGGTAAATATTTTGTGGTAAAAACTTAATTTTCTAATGTAACCACT CTCAAGTATAAAAAATTTTGCATCTCCGTAGAAACCTTAAACATATAATT GAAAAAGTACTTCTGAGCCCATTTCTTAAATTATTGTGCCCGTGAACAAT GTAAATAATTTTATGGCCAATCCATAGGAAAGGGAAAGAAATTGATAGCA CCTATGGGGACGATCAGATCGGGCATAGAATTAACCCTGGTAAAAATTCT TGAAAAGATCTGAAAAGATCGTTGAAGATCTTTCAAGATCTTTAACAAGT AAGAATCTTATAAAATCTTTGTAAGATCTTACAACGATTCTTAGGCAATC TCGAAAATTTCTTCCAACAAAAAGATCTTTAAAGATCTTGTAAAGAAATC GTTAAGAATTGTCAAGATTCTTCCCGCATATTTATAGTAAGATAATTATT ATTTCTTNNNNNNNNNNNNNNNNNNNNNTGTATTAATGAAATAGTTGATT AATGACGAGGTCATCAGTTGAATGCTGTCACTCGAGCGAAGCTTTCGGCC CTTATTCAATAACTGAACGGGGATAGTAGTAAAATCCCGTCAGCGACCGT AGTGCAGTGGTAGAGCATCCGTCTACGGTGCGCAAGGTTGTGGGTTCAAC CCCCGGTCGGGTCACACCAAAGATTCCCAAAATGGTACTTGAAGCCTCTC TGCTTGATGCTCACCAAGTAAGCGGAGCAATCCCCCCCTACCTTCAGGTA GATAGCTATCGAAAGTGGAGCCTTCAGGTCACCTCCGACTTACTTTTACT TAAGATTCCGTCAAGATCTTGAATCACTGTAAGGGNNNNNNNNNNNNNNN NNNNNNNNNNNAATCACTGTAAGGGACAAGAATCTTATTCAAAACTTATA AAAGAGTCTTATCAGATCGTTAAAGATCTTGAAAGATCTTGGCACGTTCG TAGTAAGAAACTGAAAAGGAATAAGCAAAGTTTCTTGATAAGATCTTTTC AAGAACTTTTCAAGAATTTTTACCAGGGAAGATATCTTGAATTGCAGCTG ACGTGTTTTCGAAGCGCCCCTTTATAGGCCGTCTGCTGCACAAATCTGAT GTGATAAATGTATTTAGAGCATACAACATATCATTGTTAAATTATATCCT TAGAAATGAAAGTAACACAGAACAATTTGATCCATACGATTCCTCGAATC TCAACTGAATGGTCTTTATCACTAACGATACGAATCGAAAAGTCTCGATT AGGATATTGGAAAAGTATTATTCATTTCTCAACCGGTGAAAATTATAGTC GGTTGCCGGCAATTTTTCTTTCCCCAAGTACTGACACTTTACACATTTGC TATGACATCAACGGTAATGTAAATCATTGTCACGATCCACCAATCAAGAT TGGGAAAAGTCATCACGTGACAGTTCATCAGAGGTATATCTCAAATGGAT ATTACAAATATTTCATCATATTCGATGGATTGGAAGTACATTCTGTAATC AAAAAACAAGCTCAACAATTTTATAATGTTCAAGTTTTTACTGGTGATCC GTGGTATGCTGCAGATGATTATATTTCGAATGTTGAATTCACTAATTATT TGTAATCATTTGTAATATTCTGATAATGAATTGATACTTTTATGGTAATT GTAAATAAAAAGATACAGGTAAGAGAGGGTAAAAATAGGGGACTGAAACT CGATGGGACTTGAAATTCTGATATTTTTTATAGCTGGGGAGTTAAATCTA TTGTTTTCAAGCCAATATATTCAGTGGGGATTGGAAAATAGCATAATACT CTTTAGTGAGGATTAGTTTATTTGATTATTTTCAGTGGGGACAAAAATTG GAGTATAATTTTCCACTGGGGACGATATTTTTGCTAATTTTTCCAATGGG AAAGTCTGGGAGAATGAAGTTGCAGATCATGAGAAGGATCATTTTGCAAA AAAAAAAAATTGAAATTTTGCTGACATCAGCACTTTTTTGCAAAATGTTG TATATTTTGCTGATATTCTGCTGACGACAGCAAAACTTTCAAAAGTTTTA TTTTGAAAAATTACCCTTTTAATGATATTCAACGTTAATCCAAATTTCAT GTTTCTACCATTAGCCAAACTGGAGATATTTGAAAAACAAGTTTTGCTAA CGTCAACACTTTTTAGTTTTTGCGGTTTTTCGCGAAAATAAGGGTGTAAA CAATTAGGTAACACCCCTACAGCGAAACTTCATCATGGTATCCTTCGTAG CAAATCATTGGTTTGCTCATTTTCTGCCGGCTAATGGTCTTCAAAAATTA TGGTAATTTTCAGGTTTTTGAGACATGCCATAATTACCTGAGAAGACAAA CATTTCGCCAGATTCAAAAATAGTGTTCGGAGATTATGGGACTTATCCAA GGGGGGGGGGCTTAACGAACTCATTGAAGGTTTTTGTCGCACTAAAATTT CTAACATTTTGAGTAGAATAAAAAATGCCATGTTGCCTTAGGATAGATAT GAATGGTTTTCAATAGTGTGTTAACTTTACTTAGTACCCCTTCTCACAGA CCCGGTAGAATTTATTCAGCCAGTGGGGATTTTGTATTCCCAATTTCATT AGGGCTGGGGATTTGAATTCCATTGTTTCAAGTAAAAATATATATCAATC TATCATCTTTTTATCTATATATCTATCTTTTCAGCCAGATCTTTGAATTA GGTCCTCACAAAAAGTTACGGCAGCTGAAAAGTATTGCTATTGTTAGCTG GGGCCATCTTGAAAGAGTTGAATAAAAAGTTTTGAGGTCAAGAATTTATC AATGTCCATTCTTGGCAAGTCTATACCATTAAATTATACTTTTCTTTCAA TTTTTCTTTTTCTGTTTGCTTAGCAATTAGCAAAACAGTTTGTTATCGAA TATTCATGAGTTCAAATTTCTCAATGCTTAATAGAGATTTTGATATTATA AATTAATGGTCTAACCATAGTGAATTTTGATATTTGTCATGTACAAAATA TAATCTTCTGCTTGATGTAGCTATCAAAACTTTGACATGTTATACATTTT CTGTTAAACCAACTATCCTTGAGTCTAAAAATTTATGAATCGCAAAGAAA AAATTTTTGATGAAGAAGAAAATGAAGACTTTTGTGACGAAGAGTATTTC AACTTTGAAGACCTTTGTTTGGTCGAAGAAGAAATATTTTGAAATTTTTT TTGCGGTAGATGGTGTATTTTCGGAAAATTTTTCTAAAAGACTTGTCTCA AAATCTCAAAATCATGAAAAAAGTGCTTTTTGACTTATTATTCATCCCAA TTGTTCATAGAAAAACAGCTTTTACTTTTGATGCATCAATTTAGAAAATT TTTCAGAAAAATTTAAAACAGTTCAATTCTTTGCAGACAGTTTGAAAAAA TTTCGGAACAAAAAGTTTAATTACCCATTAAAACTTAGCACTTTTTATGA AAGAGGATGATGTAACATATTATTAACGTCTTTTTAAAGTTCATGACGTC AGCTTTGTAATTAAATTCTTAATTACTTTTATGGGATTTGATAAAAAAGC AATTTGTAAAGGCAATTCTTTGTCAAAAGTGTAAAGGAACCTGAATTATT ATTTTTATGCTTAAATACCTAAATATACATTTTTTTGGGTCTCGTTGTTC TTATAAAATTGTTCTTTATAAAGAAAAAGAGTGTATCTGTTTAAACATTA ATTGCGCATGGATACATTATAGTAGGAAGTTTCAGAATTAGAATGAAAAG GAAGAAGAATCCAGAAAAAACAGCACGGGGCCATATGCGTGCCCCATTTT GTTTTTTGGATATTGATGAGTCATACTTATAGGAAGGTTCTTTCAATAAA CAGCACAATTTTTGTTTTCAAGGCCTGGAAATTTCTCTTATATAATCACC TACACTGAATGATTGAAGTTTTATCTTGATTCTAAACTTTTTCTCATCCA CAGTCCAAACTATAAAAACTCAAATGTAGATATCCGAGGTTGCAGATGGA AAAGGATTGGAAGAATAGTACAATATTGTATTTTATCATTCTAATGGTAT GTATTTTCTTTTGACAAACTAAAATAGTCTTGAAGAGAGAAAGAAATTTT GTCTGAAATATATTTTACATTTCTGCTAGAATCATTAGTGAATTACTCAA GTATTCTTGCTGGACACAACGTTGTTTCAACGTTCATCTAACGTTATATG AATGTTACGAACGTTAAATATACGTTGAAACAACGTTGTGTGCCAGCTGG GTTACTGTGNTAGGTAAAGATTAGAGATACTTTATCTTAATCGATGGATT GGAAGTACATTCTGTAGTCAATAAACAATAAGCTCAGCGTATTTCAAATT TCATTTGCAATGGTCTAAATTTTCAGGGTCCATTTTCAACTAATTTGTAT CTAACATAGGGGGGCCAATTTTTCTTCGTCAAACATCAAGGTTTGTTTTT GCTGTTCTTTTGACAGACTTGTTGCAGGATTTTTTCACTTAAAAATACTT GAAACTCCCTTGTTTGATTGGCTTTGTTCTACTTATTTTCAGTACCACTG GAAATGTTGTGTTTCGCTAAGATGTGAATCAAACATACCACCTAACATTC ATGGCGTTCACCCGAGCATGTTAGTCGACTCAGGTAAATATTTTGTGGTA AAAAATAGCTTAAATTGCTAATTAAACCACTCAAATATCAGAAATTCTGC ATCTCGGTAGAAAAATTCAGCATCATTCAACATTATTAAAAAACAATTTC TGAGCCCAACTCTTAAAGCCGCTAATTATTGCATGAATTTCATAAATTAA ACCTTCAAAGGCTGTCGCTTTGAGCGCAACAAAAGTTGAAACTTTTCAAC CTTTTTGCTGAGCTGTGCACCTTCCCAATTGTTCTTTTTGAATTAGCCAA TCAGAAGAGACATTTAACACTCTTGTACCGTGTGCAAAAAATATCAACAA TAGAAAAAAGAAAAAATATGCAGCATATCTTCCCTTTATTTTGGATCAGG GGAATGGAAAAGGCGTTCAGTGACCAAAGTGCCTGAGCCGTGCGCCTTGT TCGCCAACCATAAAATGCTAAGTGGGTAGCGGCCTTAACATATCAATATT AAATTATATCCTTAGAAACGAAAGTGACAAAAAACAAGTTGATCCATGTG ATTCCTCGAATCTCAACCGAATGGTCGTTATCGCTAACGATACGAATCGA AAACGCTCGATTAGGATATTGGAAAAATATTATTCATTTCTCAACTGGTG AAAATTATAGTCGGTTGCCAGCAATTTTTCTTTCCCAACATACTGACACT TTACACATTTGCTATGACATCAACGGTTTTGTAAATCATTGTCACAATCC ACCAATCAAAATTGGGCAAAAACATCACGTGACAGTTCATCAGAGATATA TCTCAAATGGAGATTACAGATATTTTATCATATTGGATGGAGTGGAGGTA TATTCTGTAATCAATAAACAAGCGAAACAATTTTATAATGTTCAAGTTTT TACTGGTGATCCGTGGTATGCTGCAGATGATTATATTTCGAACGTTGAAT TCAGTAATTATTTGTAAAAATAAAATAAGAAACAAATTTTGTAGTTCTTC AACAAAAGGCTGGAAAGGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050048TCONS_00050048Clytia hemisphaericatranscript
TCONS_00050047TCONS_00050047Clytia hemisphaericatranscript
TCONS_00050046TCONS_00050046Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050048-proteinTCONS_00050048-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:502049..508168 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.08 0 0.4 0.16 1.53 1.53 4.76 2.41 5.27 5.69 6.09 5.78 1.1 0.72 1.34 3.21 25.85 28.46 9.21 7.89 4.18 4.42 4.4 6.64 1.01 1.95 0.5 0.67