XLOC_036134 (gene) - C. hemisphaerica

Overview
NameXLOC_036134
Unique NameXLOC_036134
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_288:723798..729172+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036134 ID=XLOC_036134|Name=XLOC_036134|organism=Clytia hemisphaerica|type=gene|length=5375bp|location=Sequence derived from alignment at scaffold_288:723798..729172+ (Clytia hemisphaerica)
ATTTTGACAAGTAATTTTGACTAAATCGCAAAATGATGATTCTTTTTTCT ACGATCTTTAACTGAactttcatttatattttttagcaaaaataacCAAA GTCAATAAAATAGAGAAGAAAGAAGCTTATACTTGTAGCATTTGAAAGAT AGATGAAAGAATGTACCAAAAATCAGTGCGAATTTGCAGACTGAATAGTG TGAATGGTTAAACAATCTAAAAAGATCGAGACGTTTGCAGAATATGAAAG ACTTTGATAAGCCTAAGCCAAGTGATAAAGACATCCAGAATTTGAAAGTT GAGAATCAGACGTTATGTGATCAGATCAGTATATTGAAGTTAAAGtgtaa aacattcgaaagtgaaACCAAGAACTCAATGGAAAGATTCTCCTGCTTGA AACACCTGGTCAAGaggtaaaaagtttttttgtttgtcatgcaacaaata aaaaactgaaaatattactCCGTGACCATGATTTTTGGTGAAATCTTCTA ATATACAATGAATTAACCCAAGAAAAAGGTAACGAAAAACGAAAgcaatg ttttaaaaataactctcCAGCATGGATCGGCTTTTCATTTTAGGTCGTTA AACTTTAGTATTCAAAATCCTTTAATCAAATTTTGTATGGACTCTATAGT AAATATCGTCTTCTTAAATTCTTATTTTGTTGCATGACATCCACAGAGCA TGGCGTGGAGATCACGAAGCTTCCAAACACGTAGCTAACATCGTTGGTAA gatattttctttataatttttgaaaaaaataaaatgtttgtcCGTGGATT TTATTAGTAAATTGGCAGGAATGTTGGGCCATCTGTCAGAGCTGATCATg atattatttgaaaaattttttcttctggGCCAgattattctcaaaaaaat aagaaaagacgaaaaacaaaattttgttcattcttGACGTTTCGATGCTT CTTGTATCATGATCACAAGCAAATAGTTAGCTTACAAGCAAAAACGtgtt gaaaaaacaaaatttcaaattcatgatattattCTCATATTTTTCAAGTA TTGACTATGCACATTATTATGGTTATTGGAACTgttcaaaaatgatttct tcTCTTTTCAGGGGTGGCACCACCATTGTTCATTTATCGACATGACGATG AAGAAGTTGTCGCTTTCCCTAAGGTATTTTCATGGTATATATACTTAGGT GGTGCAGTACGTCTATTTTTCTATCTTTAGAAATTCGACGTTAAAGGTTT CACTATCTGATAATTTAGCACAGATAATGCCTTGATGTAACTTTTTGGAC TAAGTATGTTTCAAGCTAAAATCGGGCTAAAACCTACTGTTCTACAGAAT CTTGTGGATTTGAGGCAATTTGAGGTATCATGTTGAATTATGGTGTATGG TCTTAAAATTCAATTGCTTGAACTGAATTAAGCCTGGTCATAAATTGAAA AGGTGGCATTTTTCGctttaaaatcaaacttttttcgaatttttgtatCA TTTTCCTTTTCCATCAGTCAAGGGCCATCAATAATTGGGCATCATTATCG GCAAGTCTTTTGGAACGTTACTACAAACAGCGAGAGGATGTCATGTTTCT AAAGAAACGACAATTTCTGATCGAAAGGGAACATTTTCTCGACTCGCAAC TTGATGGTTATATTAATGAAATACCGCGTGATCATCCCGTTGATAAAGGA CTGGACCTCATTTATGCTGTCAATAAGGTATTTTCTTATACAGCTGCTAT GAGATTTGGTTTGAACAGTTTATTTCTTCACATAATATTCATGCatacct tatcagggaaaaaaatgtcggagttttatttagtcggggttttttttcgc cggggaaaaatttcgtcacctagaggtattttcgtcactttcccccgacc aaagtttcaaattcgtcacttttccccgacgaaatttacaatttagtcac tttcaccgagctaaattgtccaaatgaaatggtttccttcactagctcga aaaaagatcttgtaattcgacgtttaaagcactaatttcggttaataaag gtgtaaaaaaattagattttaattttggttgggttttgaaaattgggtaa aagttttggtcggggataaaaaaatcggttaaaagttttggtcgggtgat aaaatatcggggaaaaaattcgtcgggggaaaatttcgtcaccccctcaa aattttcgtcactttcccccgacattttttcccccgataaggtattatgA GATGGAAAAAGGAATATTTTACACCCAAATTCCTATCGATCAAtactttt caatcaatttatcATAATTTCGTTATAATATTAATCTTAGCTCGCGACCC CCATCTATGTAAAAGAGGTagcaatgtttgaaaattgcaaAAGAAGGCAC CGACAGGAATACTTGTCTGCAAAGTTCTTAGCATCCGTCTCCCTAAATCC taagatatttttataaatcGATAAGCCAAATTGATTCATATCATGCATCT CGTTCAAGTTCATGCTATCATTTGGGTCAATTTAAATAATGAGAAATTCC TGATATTACGACCCTATAACAGTTTGAAAAGTGAGGGGTTCTCGTTGTAC GCTGATTTTCAGGGGAATAACATCAAATCTTGAAAAAGGAGAGGGATCTC CTCACTACCCCCTTTTCTAAATGAATTCCCCCTGCCATATGATCCACCCA AGCTATGGTGACTCCCTTCTGAGATGTACAGTGAGCAAGTTAGCATGTTT ACCAATAAAATCTTTAGTGTTTAATTTCGAACTACCTGGTGCATTTCAGA GCAAACCTTTAGTAGAAGTGTTACAGCACACCTCTCGTCCCACCTCACCA TGGAAGAGTCGTCCATCTTTCAAGAAGATGAATGATCAGAAGTCACACGC ACGTATGATGGTTTCACCTGTTCAAAGCATGATGACTTACGGTATTAAAG CCATGTGCATGCACTGCATATTTTCCTACACTAAGGTTTATTTAGAtgag ttgtttttgttttcttattcatcaatttttaaatttaaaagagtGGGCTA TTGTCAAATCAATCTCAATTAAATTTCAATTATCATATCAGGTTTTAACA TCATACTCGGGTTATCCCTAATTTCAGATAAATtggttaaaagaaaaaat tccaaGATTTCGAGACAAGAAGATAAACCATCTaacgcaaaaattaaaaa aataaggtCTTCAAAGGTTCAAATACTCTTCTTtgcaaaagttttaattt tcttcttcatcaaattttttcattacgatttttaaatttttcagattaaG AAATAGTTGGCCTActacagaaaatgtataacatattATCCGTTTGATAT TTCTCTACAGGGGAGAGTGGAGATGCAGAACTACAAATCGATTCCAATAA CAACATATTGCCCATCGATTCCTTCAATATACAAAACGAAAATCCAAATG AGGTAGCTCTTAAGCTTAGTAACCCACGGTTCTAAACTCTTTGGATTGTT ATTTAAATTACTTCTTTGTAGAAAATAGATGGATCGATTTCATACTCAAA TTATAAACCAATAGAAAACTGTATTAACACAAGtttaacctttttatttg aaGGTGTCACCACCTACTACTTGTAACCCAACATCACAAGCGAAACTTCC ATCTTCTAGAACAAGACCATCGTCTGCTTATCGTCCCGCAACTGCAGGCC CTTCAATAAATACAAGAGAAAAATCGAACCCTACCGTAAAAACTGAACGA TCAAGGCCTGGTAGTGCTTCAACGTCGGTAAGTACAACCTTGCACTTGTA ATATACAAAAACCCTTGACTGTATTCTTGTTTATACTTTggtctttattt tgaaaactctTATTGATAACATTCATTTCTTTGCCCTaacttttataaaa ttttgattttaattgtcATTTTCATCTCCTCCACAGCGTACATCACAAAA GAGGAGCACAAAAAGTGCAATGGGAAGCTTAAAACGTGACCTCGGGAATG TCAAAGCAGGTGAGTCACCCCTCATCCCGACACACTACATCACATAAATC GTAGTTATTTTTAGGTCTGGACACTTCCCCTCCATGTTTGTGAAAAATGT ATGAGTACATGTACgttcttaggtgccaaataatcacttgttaatttttc gaaaattttccaaccccccggacattATTAAGACTCCCCCcctcgtttat taatttttaagaatattttcagttagcAAGAAGAAGTCGCCTTATTTTTC TCcaaaaacctgatttttaaAGTACAATCTCCAACCCCCCATGCAATTAA GTAGGTCCCCACTGtttatcaaaatttcgaaaattttccaaccccgtTTA ATCAAACTCCCCCCCccatttatttggcacctaagagtacttgCTTTTTG CTGCTTTTAACGGAAAAATTAGGAATTCATTTAATCTCATAATGTTCTGA GATCATCCATTCTTCTCCCACAACACTATGCTCTAAAGGGGTATGGTGAA TGTAATGAATTGAATTTGTTCAACAAACATCCTTAAAGCGAAAGCGACTG TGCTCTAATATTTAGAATGTACAGATTAACCGGAGTAACCAGGATCTGCT CGAAGATTAGAATTTAGTCTGTGGAGTTCTTTTAGTTTTCCAGTTCTCCT TTCTACTCCCCTTTTTTTCTGAAGGTGATTTGTCAATCGTCAATCTTTAT CCCTtgccattctattttattcaaTTAATGATTCCACCACAATAAGTATT CTCTGTTTTACTCATGACAGCCTCGCAAAAAGTTGGCAATCATACGAAGC AACGTCCTTTCTCAGCTCAATGTGTTGGCGTCAAATATTTTACGGCGTCG TTACATGACGTCATTGAACCTTGTACATCGGTGTCGATCGAACGTCAACG GCAACTAGATGTGGTGGAGAAAAGACTTCAAAAAACAACGCaacttttac aaaagaaattatcCATAAACCCCTTGAGCTTTGTCTGAATATCAGCGTAG TCAAGATGAAAAACTGATTTATCTAGAGTGAAGATTATGATGATGTCAAT AGTTTGCGTTAAGTTTGACTTTTAAAAACTGTCagtttttactcattttt gctagACTGATTTTAACCCGACTTTAGACATTGTATTTTATTCATTACAT CTAAACTCAAATAAGGACAATTTTCAGAATAGTCTGCATAAGTTCTCAAG TATAAAATCGAAATCTGGATACAAATAAATCTGTAAATATTATTTGagtt accttaaaggaagaaattttggcggaaagaaaatttggcggatttggcgg atttgactgaaatccgccaaattaagttcccgccaaaatttCTTTTTTCC GCCATCCGCCAAATTAAATTCCCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057341TCONS_00057341Clytia hemisphaericatranscript
TCONS_00057342TCONS_00057342Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057342-proteinTCONS_00057342-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:723798..729172 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.96 5.39 6.06 5.68 2.32 2.57 3.34 3.42 3.83 2.78 3.66 3.28 3.46 3.7 3.03 4.28 5.47 4.88 2.94 2.8 4.83 3.88 2.48 2.43 25.83 22.72 1.62 1.41 1 1.31