XLOC_034627 (gene) - C. hemisphaerica

Overview
NameXLOC_034627
Unique NameXLOC_034627
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_247:81975..92940+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034627 ID=XLOC_034627|Name=XLOC_034627|organism=Clytia hemisphaerica|type=gene|length=10966bp|location=Sequence derived from alignment at scaffold_247:81975..92940+ (Clytia hemisphaerica)
GAGAAGTAGACACAAAATCCAGTAGTTCTAGAACAACTCCCCGATTTCat gaatgacgtaatctttcaatttaaaaacaaacgcTTCCCCTTCAttcaga aaatttaattttttgaggTGAATCTCAACTGAAACTTCCAGCTGCAACTT TCACTTTTTACACAACCATGGATGCCTTTTTTGGTGAAAGATCTATTTCC TTATCTGCTTTGACTGATTTTTCAAAGTTGTAAGTATATttataaagttt attttttgtatTCTGTACATAACGTCATGTTCCATCGgcatcataaaaat cattttgattgacagagttgaaattttcaaaaattgtgtttATTATACCA GTATGGCATGATACCCTATGTTCAAGGACCTCCTTAATATGAAGGGTTCA TCCTTCTGAGTTGCAGTTTAGTCAGCCAATTTTTTGCCCTGGTTATTCTA Aatcaatgggccattccagaatttgtctgtaaccatggaggtataaagaa acaggagaagtatgctattgtaaccatgctcgccctacgattagaaaaat tacgaggtatgcatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNataactttttattttctg gctggagaaaatatcttttcaaaacaaaatttaatggatgacaaaattga acgcaaacttatttcgtggagctaaattttattctattctcgtatattag acggctagaaatcttcgatgctgatagtaagaatgttcagagcaaacttg agttctactaaaaagtcgtatttcttcgggcgagcctagaatttcttttg atttattacataaaagaaatcaaaagactttaacgaccaattaccgacaa attcatctcctgtctttctttatacctctatgctgTAACACTGTTACTAA CAGGGGGGcagacgacacaggatttccgagggcaaaagttttcaccaaaa ttcgaaatttccaaggcgagagaagaaaatgtatgaatttccagggcaat tgaatttaaaaacagtgtagctggaacctcaatattccaggattagaaaa agctaNaacagttatttggggggtcggatttaggcagggttgtcggattt aggaccactcacggtacctgtttatcttttttctttaaagaatcaacaag ccatcaacatcgataaattacacacatttcctcagaaactttgaaaatta tctgccattatgactttcttgaagccattctgaaattaaccaatcaccaa tcgggttatgtatcaGAACTCCTATGGGaattcttttccgagatttgtaa aatagctaagtcggcgaAAAAACTTTTCCCAGGGGTTTAAGGAAAAAAta gaactgctatcatttgttttttatttaaccatatatttaaatttacgCTC AAAAacacttaaataaataagttaacaatattcaatatactatttgtatc tctcagaaaataaacacttacagaacgacatcaTTTGGAacacccccgta tttggaccattctattgtgggcgcaaaatagggaggaaactaagtagcac cctcagtgcaagattactgcctcatctttattcgcccgtgTGAGAATgca agctaatcatttttttctcaagcGCTCTTAAGGGGAAAAGTaaagtgatc aatattctttgtaggaaaaacgtcagaaacaaacccaaagatcaaaagat gtattttgttgttgacaatctatcctgtgaagatgaaaaaatttctgcta caTTTCTGtaatgcgtttttttcggaacgctaattcttgatctttccttt aaggtaaagaggttgcgagatttgggttagcgaggcaaaaattgctaaaa agctggtaaaatcgtattgctcaaaaatcaaagttccagcctcactgaaa aaggcaaaaaagagtggaattacCGATGCATTTTggaaaagtacatggat ttttattggaatttccgaccaccactggaaaagaaaaagtatttccgagg ctagaaaaaaattaaaaatgcactTCATccgacggggggtaacaaaaatt ttctggaattgCCCAATGTAAAAgcatttttatttgcaaaatcTGAACCT TACACATTGCAAGTTCACAAATATGGCTAGATATTGCTGCAACTGAGTTC ATAACAAATTAACTTCCACTGTTAGAAGTCATAATTTTCCGTTGTCAAAG CAGAATTATGAATCTCAAAAGAACTCTTTTAGCATTTTGATTAATAGCCT TGATAtccagacaaacaaacaaaataaaataaaatagcaaaagaacaaag gaattacggGGGAATTATAACCATAGCCACCATTTTGCAGCAATGAAGAA TCGTGATtttacggaaatgggaatcctcatattgaataaagcatcttctg aaaaatttcattcttttaccataaatgcgaaaatgaaaaacgaagaagct tTTGTTTTCTGATCATCTTTTTAATCTaccatgaagtgttataaaattct ttATAGAAAGACACATTCTCCTACGGTGAGGCTTCGAAAAAATGACGTAG AAAAATGCTGTTATATAAAGAGAATGTCATTTTATCTTAACAATTTCGTA AACTACGTCACAACCATGGAGTGcttacttttagttttatgacttgttct cactcgtttggtttctggtaataaaaagaaagttgttattgtgaactttg aacatgcttaaaatcgaggtactttcactaactgcctttatgaatgtggc tgatgtttggatgtagtttaaagtagttttgaaaggcttttgattttgta aaagaggttttatggtaagtaattatgtgtgtctgcctgggtttccaaag ttttgagattctgtcaacaagggtttactCAGAGGCTGTGTCATTCAAAA TGTATATACCAGACTTTTTTAGCTGCATCAGACAaagttttagaaacttt gtattttgaggtaagagtttttttttctgaaattttgagtctggataccc aggctcaTTGATTGAGTATCTTTGACAATGGAGAGATATATAATATAAAG GAGAGATTCATCCACTTAACCCTTGGACAAACGCATGAATGatgaataaa aatttaaattttagcaTGCATAAGTTCTTAGNATAACAAATTAACTTCCA CTGTTAGAAGTCATAATTTTCCGTTGTCAAAGCAGAATTATGAATCTCAA AAGAACTCttttagcattttgattgaTAGCCTTGATAcccagacaaacaa acaaaataaaataaaatagcaaaagaacaaaggaattacggGGGAATTAT AACCATAGCCACCATTTTGCAGCAATGAAGAATCGTGATtttacggaaat gggaatcctcatattgaataaagcatcttctgaaaaatttcattctttta ccataaatgcgaaaatgaaaaacgaagaagcttTTGTTTTCTGATCATCT TTTTAATCTaccatgaagtgttataaaattctttATAGAAAGACACATTC TCCTACGGTGAGGCTTCGAAAAAATGACGTAGAAAAATGCTGTTATATAA AGAGAATGTCATTTTATCTTAACAATTTCGTAAACTACGTCACAACCATG GAGTGcttacttttagttttatgacttgttctcactcgtttggtttctgg taataaaaagaaagttgttattgtgaactttgaacatgcttaaaatcgag gtactttcactaactgcctttatgaatgtggctgatgtttggatgtagtt taaagtagttttgaaaggcttttgattttgtaaaagaggttttatggtaa gtaattatgtgtgtctgcctgggtttccaaagttttgagattctgtcaac aagggtttactCAGAGGCTGTGTCATTCAAAATGTATATACCAGACTTTT TTAGCTGCATCAGACAaagttttagaaactttgtattttgaggtaagagt ttttttttctgaaattttgagtctggatacccaggctcaTTGATTGAGTA TCTTTGACAATGGAGAGATATATAATATAAAGGAGAGATTCATCCACTTA ACCCTTGGACAAATCTCGTTGTAAAGGTTTATCttacagaaaaatattca ttttcctaaaatacttatttttagatttttccttTTGCCTTAGCAACGaa gatatttgaatttttcgcGCATGAATGatgaataaaaatttaaattttag caTGCATAAGTTCTTATGCATTTCTAAAGTATGTtgaatctttgattttt tcagggATGTATCTACaaagaaacatttgaaaaatgtatATGGTGCCTTA TCATTATCCATGCTGTCAGCCAGTGTTGGTGCTGGTCTTCACTTGTATAG TGGATTGAACTTGGTGAGTTGAATGATTGTCAATCTACCATATACaatgt gtcccaaaaaaagcacagttttatataaagtaaaatcctcattaTCTAGA CTAGGCTTAAAATTTTCTGTTTAAGCAATACGATATTGGattcccaagat gattgaatagggTTTTAGATATTGAAACGTGAAgataagtcataaaattt ggcataaattatgaggattttcctttatataaaaatgtgtTAGTTTTTTC CGGAAATGATGTACATGATAATATGCTGAGTCtgaatttcaattaaaaaa cattGTTCGTTAGCTAAACCATTCACAAAATATACATACAGGCCAATCAA TTTATGCAATTGAGTAATCAGTAATAATTATTATAATGATACATTATTAt tgatttcaaagattttatttagattttgattaatttctAGGATCAGATAT AATATAGAGCTgagccaaaaatatttttaaaatttttctaggGAATACTT GCTCTCCTTGGTGGTATTGGATTCATGCTTGGGCTAGCATTCACACCAAA TGAATCAAAGAACCAAATGACCCGTTTAGGTATCTATGATTATTTGAAAC TCAAATCTTTTTAGATGCATGATTCATTTTCCACTCAAAATATTTCAGCT AATACAGATCATTTTATGGAatttcacgtttttttaaaCGCTTCTGCTCA ACTTTTTCTGTTAATCTAAGAAACTAATAAAGAATAATTTAtaagttcat ttttcaaatgtaaaaaagaaatttaccaAAGGAATAGGAGAGATTAGTTT AGCTGATCTCCATATAGAGTAAAAATTGGTTGAAGAATGGCCATTCTCAC TATCAATATGTAAAGTTTGATATTCTTGCTCTAATGAAAATTTCCTCGTC AAGTTTAACGAATATATCGTCAATTTCAAACTGCCCCAAACTGGTTAAAA ACTAAGGTCATGCAACGTATTGAAAGTAGAAGAAATGcagtataactttt ttttttcattacagGATGTTTGTTAGGTTTTGCAGGCTGCACAGGTTAGT GGTGTCTTTACTTCATTGAAATTTCACGGTTAGGTCAATATTAGATATTA TCAAATGACTTCTCAGGAATGTTgtgaattttgtgattttttgatctcac gaaagtttctgctcgtgaaAACTAACATGTCTAAAGTATTTCTTGTATGA TTTTCCACTTGAAGATTCCCCTTAAAATTGTCTTCAATCTTTGCTTGTTA GGTTTGTCAATGGGACCATTATTGGATGCTGTAATCAGTATTAACCCCAG GTATGACATAATTCTATAATATTATcattattttacatttttaaaaatac tttaaacTATAACGATCGCTTTTCCAACCAAATAGTGGATGTCCGGTGTC agataagaataattttttacAACCAGACAACCCCAACACCGGACTCATGG AAGTCCGAAGTCCGATGTGTTCGGTGCACATTAATTTTTTCCGACGCATG TCCGGTGCCTAGAGCTCTTGACATTTAACACCGGAATTACCACGTTCGGT GTAGCGGAAGGATACTTTTTGACATCGGACTGTACGGTGTGCCGGTAGGG TCGTCAAATACACGATCATTTTTTTCTAACAATACTAACTTtttcactat atatatatatttaaatATCTACAAAGTGTTTTACAGTGTACCAGAGCGTA CTTATGTTTTTTTCTCGTCTTTTTCTACAAAGCATCGTAACTACAGCATT CTTTGCCACCTGTGTCATCTTCATTTGTTTCACCTTGAGTGCATTATGGG CTGAGGAAAGAACATATTTGTATCTTGGTGGTAAGCTTTTAATTATTGCA ATCATTTGTTTACTTCCGGGTACCTAATAGCGGAGggcccccgctaatta atttttcgaacattttccacccaggacagaATTGCACTCCGAGaccatcc tcactggattttttaacctggAAACAATAAAGTTACTATCCCCTTGGAAG AACTTCCACCGAGGCTGTTAGCcaggggtgttttaaagtcTCTTTGAGAT ACAGGATAAAAACGATCAACGCGCATGTTACTTGGACTTAAATTTATAAA ATCATCGTTTTGATGAATAATTATCTTTTAGGCACCCTCCTTTCTGGAAT GTCCACATTGTTCTTTCTTGGTTTGATCAACATCTTTTTTGGTTTCCAAC TCCTTTACCAGGTAACAGATCTAATCCTCGACTTTCATGTTTTGCCCTTT TGTGTTATTCAAGAAGAAAAGTCTTTTCATCGAATGAACTGAAGAAATAT TTTAGAGGATCATGTTATACATATATGAAAGATATCCATTCGAACACCAG CCTTGATTTCGACTAAAACCTCAGATGGTTCAAGTACATGTCGATTTCAA GCTTTAAATGGTCAGCTTAAAAAGGAACATTTCAAAGTTCAACATGAAAA TCCGAAATAAGAACAGCTGAGAACATTATTAAGTGGTTCTTTTNAGCACC TCACTAAAagccgggatttttcatctcgtttcttagtgagttccactttg acgattttcgaaaaatagaagcctttcaagtgttttgacgcaaattcgct actgcaggagcttcgaaagttaaaagtgacgtcaaaaaagacgttagagc ccgaaaacccgggctccaaacattcgaaaaagtggcaaagtggaatagac ggcaattgcgtaaaaaaaacgCGGATGACGCCTAGTATAGGCTATAATCC CctcggctattaggtacccgagagtaggtagACTTTTCAATTTGTTAAGT ATTTTTGAATTAATAATTTGTCATCATTTTCGTAGGGGCCTAGCTCGGGC TTgtgattttgactttgtttttatctcaaTTTAAAATTCAgtggaaaaaa ttgcactccgaaACCATCCGCACTGGATTTTTTGACCTGGAAACAATAAA GTTTCTATCCCCTTGGAACAATATCCACCGAGGCTGTTAGACATGGGTGT TTTAAAGTCTCTTTTGAGATACACGATAAAAACGAACAAGGCACATGTTA CTTAATGTAAAATCATCGTTTTgatgaataattattttttaggCACCCTC CTTTCTGGAATGTCCACATTGTTCTTTCTTGGTTTGATCAACATCTTTTT CGGTTTCCAACTCCTTTATCAGGTAACAGATCCTATCCTCGATTTTCATG TTTTGCTCTTTTGTgttattcaagaaaaaatgtcttttcatcgAATGAAT TGAAGAGGTACTTTAGAGGATCGTGTTTAATTTGTAATACATATATGAAA GATATTAATTGAAACACCAGGCTTGATTTGGACTAAAACCTATGAATGAA TTAAGACTAATGTGAGGCTCAGGTGTCGATTTCAAGCTTTAAATGATCAG CTTAAAAAGGAACATTTCAAAGTTCAACATGTAAATCCAAAATAAGGACA GCTGAGAACAGTgactggttcttataaataaaaccttattttaaaGCAAT ACACCTATTAAATTCTTAATCGTGAGAAGGCTGGGTTGGAGTTTACCCAG AAGAATCAACGTTGAAACCATGTTCGGTTTCGTCAGGTTTCgtaaaccgg ttttttgacgtttccaattttgacgttcactCAGTGTTTCgaaaccgttt cgtttcggagcgaagcATGGAACTTAGCGTTAGAACTTGGTCTGAAACAT CTGTATCTTTAAGGAAATCCATGCAAAGACTTCGGGCATTTGACGTCATC TCTTCATGGTAAACTCTAACCAAGTTTTCTCACGCAGAAAGGGTTAATAA ATATATAGCCTAAGGCTGAAACTCTAAACGTGTGACCTGTATTTAACtcg atattttttattcatgatatgcaccaatagctgattggttgtaagtgacg taaaatcagtcaatacgtcacattcaaccaatcagctgttgggtccgttg aagacattacaatggtaCATATCATGACTATGGCATTTTTATCACGTTTA GGTTCATTTGTACGGTGGCTTGTTATTATTCTGTGGCTTTATCTTGTACG ATACACAACTCATCATCGCCAAACACAAAAATGGAGACAATGATTTCTTA TGGTAAGTAATAAGTTTTTTGTTTCTGTTCTTGTTCCTGTCTTACTGAAT AaataaaaagagatttttttcggTTTTAAACGTCCCAATGGGAATAGTTA AGTAGCACATTTTTTAATTGTCTTCTTCTGATTTTCTCTATACATttctc cgggggggggggggggcccggggTTTGggagttttaaaaattttttgtcc ctggggggggtgatttttttttttttttggttttttcttttcttttcccc gggggggggggtctctctaggtttgcgagatttcaaaaatttatgatcCT TGAGGgagttcatttttgattttcgtagtTTTGGAACCCTTGTAGAGACT CAATTGGTTTTTGTACACCTTTGAAGGACTTTCGAGTGTGTGAAAAAGGG ATCCTAATGGTTGgtacatacccggcacccattttgctaTGTATCCTCCC CCGGGACATTATTCTATAAACCCTTTGACATTTCTTTCCTCCGGTGTGTT AATTTTAAGTTTATATCTAAATTTAATCTTGACAATTGTTCTGTTAattc tttcttcatttttaggCATTCAGTCGATTTGTTTTTGGATTTCATCAATA TCTTCCGAAGAATTATGATCATTCTTGCAAACAAAGTAAGGGTTTCATTA TcaacatttcaaatttctctttcaatttctttgaaCATTTGTTGCAACTT TTACATAAAAAGAATGGGCGAAATTAATATTATTTTTATGTGGGGTGAAG GAtgtattggatattttgtccgggggctACCccctgaaaaatctgcaaag tTTGCCTTGCTTTTGGGACAAATTTGCTCTGTTTatgggtaattttgaat gtcctgGGGTTAACTGATGCttttccgggggtaaatttccaaaagacaTC TACGTGACATTGAAAATCTTAAAACCCCTGGAAATGAACCATTCTACTTT GCAGTATTGAACCATTGAACACGATAATGTCtcttgaaaactttgaaagc ttcttgaaaatcttgaaaagcaTGATCATCATAGCATGCGTTTGTCTTGT TTTTTGTTCAGATTATTACAGCATTTGAGACTTTGTTTTACCTTACACAA ACCTTTGAAACAGAGAGCAAATGGAGAGTTTGATTTAAAGAAGCATCGAA ACTATCCAAATGCCGCGACAAAATAAGTTGAACCATCTGAAACTACCTGT ACCATCATCCCTTCCGATAGTACTATCAGAGACTCTGGCTTCATAGATAA AATAATTAATTGCAGTCGTTATCATAATATTTAAAGATCATTTTCTGtgc tttttttcaggaaaacaAGAAGAGTAAGAAGAAGAACTGAATTCAATAAG AGATACTTGATGCAATGTTATCGCAAATTTATTCCTCAATTCTTGGGTTT TAATATGGAAATCAGACTGTACTTTCTTTTTTTGTAGCATCAAAAGTTTA TACTTTGAAGTAATGCAAGNAATGTTATCGCAAATTTATTCCTCAATTTT AATATGGAAATCAGACTGTACTTTCTTTTTTTGTAGCATCAAAAGTTTAT ACTTGGAAGTAATGCAAGCATAATGTACTGTAAAATAAATCATCGTGATC TTTATTCGAGTAAATAAATATACCATTCTGTTGAAATTCTATTCtttgca ttttgttttgaaattt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054941TCONS_00054941Clytia hemisphaericatranscript
TCONS_00054942TCONS_00054942Clytia hemisphaericatranscript
TCONS_00054943TCONS_00054943Clytia hemisphaericatranscript
TCONS_00054944TCONS_00054944Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054944-proteinTCONS_00054944-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_247supercontigscaffold_247:81975..92940 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMBIM6PREDICTED: bax inhibitor 1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
376.64 388.19 270.96 237.01 71.17 48.41 146.57 148 218 185.73 230.48 172 228.48 204.57 167.33 166.15 149.45 170.01 219.4 299.08 276.75 261.11 223.27 239.73 176.55 214.97 394.14 432.99 241.58 212.51