XLOC_036772 (gene) - C. hemisphaerica

Overview
NameXLOC_036772
Unique NameXLOC_036772
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_31:44..3520+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036772 ID=XLOC_036772|Name=XLOC_036772|organism=Clytia hemisphaerica|type=gene|length=3477bp|location=Sequence derived from alignment at scaffold_31:44..3520+ (Clytia hemisphaerica)
CTCTTTTTccattgttatttttcattcacTTTGAAGTTTATtgattatat
tatttttatctACTTAGATCAACATAAAAGAAGTTTTCAAAGGAAGACAG
CTCCTGAATATGACAGAAATGATGAAATGGACATTCTCCATAATAAGGCT
GCGGTCACTCAACAAGATGATGATTTGGAGAGTGGATTTGATGATACAGC
AGGTGagaaaatctttacaaatagaaattATCGTTATTTTTCTACGGTTC
tctttttctattgttatttttcGAAGTTTATtgattatattatttttatc
tACTTAGATCAACATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATA
TGACAGAAATGATGAAATGGACATTCTCCATAAAAAGGCTCCGGTCACTG
AAAAAGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGGTGagaaa
atctttacaaatagaaattATCGTTATTTTTCTACGGTTCTCTTTTTcca
ttgttatttttcattcacTTTGAAGTTTATtgattatattatttttatct
ACTTAGATCAACATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATAT
GACAGAAATGATGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAACA
AGATGATGATTTGGAGAGTGGATTTGATGATACAGCAGGTgagaaaatct
tttacaaataGAAATTATCGTTATTTTTCTACGGTTCTCTTTTTccattg
ttatttttcattcacTTTGAAGTTTATTGATTATATTATTCTTATCTACT
TAGATCAACATAAGAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGAC
AGAAATGTTGAAATGGACATTCTCCATAAGGCTCCGGTCACTCAACAAGA
TGATGATTTGGAGAGTGGATTTGATGATACAGCAGGTgagaaaatctttt
acaaataGAAATTATCGTTATTTTTCTACGGTTCTCTTTTTccattgtta
tttttcattcacTTTGAAGTTTATtgattatattatttttatctACTTAG
ATCAACATAAAAGAAGTTTTCAAAGGAAGACAGCTCCTGAATATGACAGA
AATGATGAAATGGACATTCTCCATAAAAAGGCTCCGGTCACTGAAAAAGA
TGATGATTTGGAGAGTGGATTTGATGATACAGCAggtgagaaaaatttga
aaacaacaatTCTCCCGAGTAACAAACGTGTTGACTATAAATGGATAAAC
TTGAATTTcttgggtcatttattaaatttggttcattggatcaaaagtta
tcctaatttgaaaaaaaagttacttCAGGAAAGTactcaaaaacgttgaa
aatcgacctatcaaatttttattctgaaattttcagtagcgACAGCTTTT
GCACGAATAAGAGCATTACGTAGTAATTtagaaacataatttttttcaaa
cttgagcctagaaagggtttaaaatcttcatcaaaatcatttccaTTTGT
AAAAGGATTAAACTTTTTAGATCTCTTTTTAGAATATTCACctgaaagag
agaaacttttttgtggcgcaccagGTATATAATATCACTATATTGAAAAc
gatttcattttctttcagcTTCTATTGCACGCCCTATTAGGAAAGCCAAG
ATGAGAAATTCCAAAGAGTCGACTGACTCGGTCACAACCAGTAAGCTTTT
TTTTCATCCTATCAGATTCATGTCCCGTTTCAAgctatttttcttttcgc
atctTGAACTTTCAAAATGTTGTCAATTATGAATACTAACTATCAGAATT
TTCCTTTGAATGTAACAAAATGAATCCTTATTATTGTTattcttgttttt
attattattgtatTCAAAGATTCTATTGTATTACTTATCTTCGTTAGCCG
AATTGAGAAACCAGCCCATAGCAAACCCAAACCTCTGATAAGTTTTACAT
CTCTTTCAGGGGAACCAGGAATTCGAAAACGTGGCAAAGAAAATACGAAG
GCGAAAAAAACATCAGCCTCAAGTATGGTTATTTTCCCGTTATAAATGTC
CAGGGCCTAAAGTTACTCTTGAAATTGCCTTTTTGATTAACATAATTTTA
TATCTTAAACTACAGGTacatgaaattttattttcaaaactttttagatA
TAATCCCTATTTCTTTTCCAATTGAGTTTGCCTCTCATTTTGTATGCCAT
TTTGAGTGGTACAATATCGAATCTTTTGTATATATGACAGTCAAATCTAG
TATGGGAGTATTCCTCTGGCTCTGGGTCATTTATTATCACAATTGtaatt
ctcttttattttagacAACAATTCAATGAAACGCAAaagaaaagaggaaa
agaaagagACTATTATGTGTACGGGATGTGGAGAAAAGTACGACGAAAAA
ACTGATGATAATAGGTATGAAGAGTCGTTATGTTCGATTTTTTAGATCAA
AAGCACTTCCTTTTTAAAGATTATACAAGGAAGACCTTTCTTGGAATTAA
AGCATACCGTTTTCTTGTGAAAATTTAGAAAGAAGATATTATAGAGAATG
ACTGGTAGCAGTAGTTTAACCTACTTTAAACACCATCAGTTTTTGCTTCT
CAATCTCAATTACTctaataatttaattttgaattttgcaaaaaattttc
aCCCAATACATTTTTATTCCGAAcccctgcttgttaatttttggaaaatt
ttatttgaaagttatTTTCCTTGCCCTAGTTATTCTGTATTAACCTGCTT
TTCTAAAATTCTCTCTGTAATACCTACTCCTGCGAAAGGAGAGGGGATCC
AGAGGCTTCATATATAATATCTATATCTAGTATCCACTGGTATTCGAAGA
TATTTCGAATGTCTGTTTTTCATGTTTGTTCGATGTCTTATCATATTTAT
TATAGGTGGGTGCAATGTGATGCATGCGAACAGTGGTGTCATCTCCAGTG
TTCCGGCATAAAATATCGGACGTCAAAATATGACACTATTAATCTTGAAA
ATATACCGTTTAAGTGTAGAACGTCGTGTTTAAAGTAAAGATTGAACAAT
AAAAAGTGTCTGTATTTTTACTCAACGTAACTACAGTAATCGTATTTTTA
TATGGTCGAGCTCTCTTTTGCGAATTGGGATAAATGTTTTACGAAGACAA
TAACAATGGAAATAGGTCTTGAATTCCCAAGtcaattgaatgaaaacaaa
aacaaaatttgtcaAAGTCTTTCTTGAAGGGAAATCCGGACTTTTTTGCA
CGTCCTATGTAATAGGCTAATCGCAATAAACAATTTAACCCCCATGTTGA
GGAAGTCACTTTTGGAAAATATTCATCCATAGTCCTTATAAAAACCCTGG
TCCGgaagcttatttttcaaatattttgttagctttttcctttgttgcca
tcaaaagataaaaatcaatttgctcAATTTTGGATCACGTTACCGagtac
tcctcttgggattggtttgagcaaaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058363TCONS_00058363Clytia hemisphaericatranscript
TCONS_00058364TCONS_00058364Clytia hemisphaericatranscript
TCONS_00058365TCONS_00058365Clytia hemisphaericatranscript
TCONS_00058366TCONS_00058366Clytia hemisphaericatranscript
TCONS_00058367TCONS_00058367Clytia hemisphaericatranscript
TCONS_00058368TCONS_00058368Clytia hemisphaericatranscript
TCONS_00058369TCONS_00058369Clytia hemisphaericatranscript
TCONS_00058370TCONS_00058370Clytia hemisphaericatranscript
TCONS_00058371TCONS_00058371Clytia hemisphaericatranscript
TCONS_00058372TCONS_00058372Clytia hemisphaericatranscript
TCONS_00058373TCONS_00058373Clytia hemisphaericatranscript
TCONS_00058374TCONS_00058374Clytia hemisphaericatranscript
TCONS_00058375TCONS_00058375Clytia hemisphaericatranscript
TCONS_00058376TCONS_00058376Clytia hemisphaericatranscript
TCONS_00058377TCONS_00058377Clytia hemisphaericatranscript
TCONS_00058378TCONS_00058378Clytia hemisphaericatranscript
TCONS_00058379TCONS_00058379Clytia hemisphaericatranscript
TCONS_00058380TCONS_00058380Clytia hemisphaericatranscript
TCONS_00058381TCONS_00058381Clytia hemisphaericatranscript
TCONS_00058382TCONS_00058382Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058381-proteinTCONS_00058381-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_31supercontigscaffold_31:44..3520 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.47	4.37	1.46	0.58	10.36	8.54	10.12	11.49	8.4	8.15	10.39	8.29	7.67	10.42	12.12	13.86	15.4	15.93	12.21	10.69	12.27	14.26	8.28	8.44	6.56	6.87	6.45	3.57	4.83	2.97