XLOC_039489 (gene) - C. hemisphaerica

Overview
NameXLOC_039489
Unique NameXLOC_039489
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_377:25852..31472-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039489 ID=XLOC_039489|Name=XLOC_039489|organism=Clytia hemisphaerica|type=gene|length=5621bp|location=Sequence derived from alignment at scaffold_377:25852..31472- (Clytia hemisphaerica)
AAATCTGCAATAAAAACAAGAGTGGTCTGTTATTAGTGGAAGAAGTCACT CCATCGGAAATTCTTTTTTAAATTTCAACCAATGAAATTGCTGCATATGA TGAAGTAACGACTGGCCCTATTTTTTGGCGCTAATGGCTTTTCGGTACGG TGCCTTGGATTATGAGCGGTCTTATAACTTTATTTGTTTCAACTGTTGAT TCAGTCAGTGGAAGTAACTGGATTTTAAGCATGTTCAAAGTTCACNTATT TGTTTCAACTGTTGATTCAGTCAGTGGAAGTAACTTGATTTTAAGCATGT TCAAAGTTCACAGTAACAAGTTTCTTTTTATTACGGAAACCAAATGAGTG AGAACAAGTCATAAAACTTAAAGTCAGCGCTTCGTGGTCCATGGTTGTGA CATAGTTCACAAAATTGTTAATGAGATAAAATGACAAAACGAAAGCTTCT TCATTTTTTATTTTTGCATTTAATGAGGAAGAATGAAATTTTCAAAAGAT GCTTCATTTGATATAATGAGGATTCCCATTTCCATAAAATTGCGATTCCC CAATGTTGGCTATGGGTAATTCCTTTCTTCTTTTGCTATTTTCTTTTATT CTATGTGATGTAAAGACGATTCTTTCTTTTTTTATTTCTTCATGTTCGCC AATCTGAGGAGTACCATAGGAAAGCTCATGAAACCTGCAAACTTAATTTT GAGTTTAGCCTTTTCCCAAGATTGGCAAACAATCCATGTTGACCACTTAC AGCTTTTCTCTTTGATCTTTTGTTGGTTTCTTTTGTTAATTTCTTGCATC ATCAATGACTTCTTGAAATGGAAACACACAGTTTTTACCAAGTTGCCTAT ATAGGACAGCACATTCTCAAATCCGATGCCCTGAATGACTGCCAGTGGAA AAAATTTCAATGATTACAAAATTCCCTCTCAAAATTTAATGATAAACTAT GGTTTTGACCTTTCTATTGTTGATATCCAGGCATTTATTCAGACCCTGGG CTAAAAATATTTTTCCTAAAATAGGGTTTGAGATGAAAGAAAAATTAGCA GAAAATAGTGACATAACTCACCAAATTCTTTAATTCTTTCTCTTAGCAAC CGGGCAGGAATATTGTACCTGCATCTTTGAGTGCAACTGGAGCACAACTC CATGCGATGCCACATCTTGTTACTAATTACATGACAGTACCATTGAGTCA AGCCAGGGGTCAACACACCTTTCAAGCACACATTCCTGTAGGAATCAGAG CAGCTACAGCTATTGCTCCCTCAAGAGCAAGTATTGCTACTCAAAGGTTG CAAACATTAAAACCAACTAATATCACAAACCAGGTGAGGCTTTTAAAGTA TATCAATATAGACATATTGATTGTAAAGGCACAGTTTTATTTTTTTCTTT TGTTTGCTTTAAAACAATTTCAAGTGAACAATATATAACCTTTAAAATAA TCAAATTCTTACCTTAATAAGACTTTCCTACTGAATTGCTTATACTATCT TTTTCTAAATTTCAAAGACGATTTCAAACATATTTTTATTCTTTTAATTC AGATTCAACTACCATTGGCACCTCTTTCAAGTATTCCGATATTGCCGCCA TCAGTTGCAGCCAATAACCGTACAGGTTCTCCAACTGTGACCACCCATGG TATGACATCAGAATCTCGACATGGATCTAGGACACATGATTCACACAGTG CTCTGCGTGGAAATATTCAAGCTACAAGCCAAACAGCAACCATTCAAGTT GTTGCATCTGGAAATCAAGTTCATCTCCCAACATCGCTTTTGACTACAAA AAGCTCATCTTTCAATACAGCAGTGCCTAATATGTTGAAGATTGGTGTCA GCTCTCATACAAATGCAGCTTCTGTAACTCCCTTACCAGCATCTGGTTTC AAGCTTGCTGGGATTGGTAGGAGTTTTTTCGTTCGACTTAAATTTGCTAT TCTAAGACATGATGCACTTTTCAAACTATAAATGTTTGATTATCTTGAGA GGAAACCAGCGCTATGGTTTGACTCACTAAAAACATACAACTAATCTTTA AGTGAGTTAACTAAAGTGCTCTGTTTTCACCTGATTCTAGAGTTATGGAA TGGCAAAGGATAAAAAAATATGTAGATACCTTAAATCTCCTTATTTTAGG GAAAGCGTATCCTGGTGCATCCAGCGTTATCATACCGTCTGCAAAGCCTG AAGTAAGTTAAAATGTTTATTATCTTATTACATTAACCAGTGAATAATGT TATATGTAAATGTACGTTAATGTATAATGTTGAATAATGGAAGTATTTAC AATTTTACTTCTTTAGGAACATCGTGTTTCATCGTTCAGTCGGTTCCCAA GTCCACATAGTGTCACAATACCTGCTCATCAGATACAAGGCTTGCCTGTG ACTACAACCATTGCAAATAGCCAAAGTCTCACTGTAACTACTTCGACCGA AGCTAGGTAAGATAAAAAATTTTCTTTTTTAATTGTAGCAATGGGTCATG AAATGAAATAGTGCATGACCACAGTACTCCCAGGGGTTTTGAACTTGTAC CTCCTAATAGCCCAAAATAAGATAATTACAAACTGAAACCTACCTCTGTA ATTAGAGCAAAATAAAGAACTGTGCTTTTAACAGCTTAAATATTTTCAAA AATTAATATATGGGGGGTTTCCTATTCGGGTCCATGGTTGGAAAAAATTG AAAAATAAACAAGCAGCAGAGGGCTTTTATTATTAGACATCTGCCAGCAG TTGTTTCAATAATCAAATTTGCTTAGAGGATTTGATAGGTTTAAGCCATG CTTTATATCAACTCCCCATATATACAAACCATGTTAGACCATATCTGTAT TTTTGCTAACAGGTCCCATTCAAGCATCAGTGTGCCTTATCAACAATTAC CAACAGCCGCGGCTTATGTTTTTCATGATATTGGTAAGTGAAATTTAGCT ATCTAAAAATTCTGTCCTGAAGCAAGCTGACTCTCCAAAACTCTAACAAC TTTCTTTCCTTGATTTTACAATAATGATTTTCTTTTTTACATAATAGGCT CACCACTTGGTCTTCACAATTTCTCCCATCAACTTGTACGGCCACAAAAC ACTTCATCAACAGCAACTGCATTACCCTTGTTTACTGTGGATTCTTCTCA TGCAATCTCTACTGTACCAGTCTCCGTTCCTGTCACTAAAGGTTTGTTAT GAAAAGTACTATCAACTCCTGCTAAGTATCTTTTTCCTAACTTAATTCTT TCCCAATTATATTATTTCTATCATTCATTGCAATACAAATTTAAGCATAT ACCGGGTGCACCAAAAAAAAGTATACAACTTTGTCGAGATATTGTGAGCT TCAGAATTTAAATTTTTTGTTCATTCTTTTTTTATTGTATAGAGGATACT TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNGAGGATACTTTAACTTGAATTTTGAGCTATCATA CATTAAATTTGAAAAAGTAGTTCGAAAGTTATTTCCAAAAAACTGACTTT TTTTCCATGTCGAAATTTGAAAAAATCATTAAAAACAGCAATCACGCTAT AAATAAGACAAAATGACAAAAACACAATTTCATTGTTTTTTTTATTCCTT TTTCTCTTATCTTATATTTTATATATTTTATGTATGACTGGTGGTGATTA TTTCTCATTATCTTTCTTTTAGGACACTTGCTGGCAACAACAGAAGCATC AGAAAATTCTAGAGTGGAGTCACTTACAATACATGCAAACAACTCTCTCA ACTATCAAAACCTTTATCCCAATCTTTTAACTAGCAATATTTCGACCACT TTTACAGTTGTCCCCACAACGTCTACAGAACCATCATCAAGGCCTAGTAT CTTACGCAAACGACATGCTGAAACAACTACACCGTAAGACTTTAAGTATT TCAATTGGACGAGCGCTTTGATACATTTCTTATTTCAAAGTTTTAATCTA CTCTCAGATATCTAATCTGACATCTTTTATGGTGTAAGTTTTTCAAAAAT GCTTGGATAAAGAAACAAATGGAGGCCATATCAGTCTAAAAAATCAGAAT TTCCAAAAAACTTGCAAGGGACATTTATTAAGCACTTTTTGCTCTTGATA TCTAACTGAAATAACATAATATTGTGTTTTAGATTTCCTGTACAGCCTAC TGAAAAGGAAAGAATATCGAGCCCCTTAAAAGTTGACCGGCCAAGTGTTC CCACCAGACTAATGAGTCCACCTCAGTTAACAAGGTAAATATTTTTCACA GACTTATAAAAGCCAATAGCTGTTAAAAAAATGCAAAATACAACTGTTGC TGAAAACTCTTAAAACCCATAAAAAATTGAAAGAATTTTATCAAAATGTT GGCGTACCCCATAAAATAAGATCCACCAAGAGCAACACAGATCACCTATT CTATACCCTTGCACATCTATAATAAATTGAATGTTTTCTTCCAATAGTTA GTTTTCTTAAGGTACTTAAGATTTTTTATGATGTAATAATTACATAACTG TTTCAGTGAAAAGCCTGATGTAATGAAGCCAATCAACCACTCTATTCAAA GTATTACAGCTGATGTTAAAAGCCCTCCACCTCCAAGTGTCACTTCAATA CCAACTGCAACGACAGCACCAATAGCTATGATTGAACAGCAACAGCAGAA ACTTCCTCCTGTTCTGACGTCAGCTAATACTGTTACAATGCCATCAAAGA TTGCAATATCTATTCCACCTCTCGTCAATGCAGTACCTAACATCAATAAT ATTAATTCGATGAACTCCTCAATTCCAGAAGCATCACCTAAGAAAAAACC AAGAAAACAGCACATGTAAGGAAACTCCCTGTCAAATTTTAGGTTTTGCT AAAAAACAGAGTATTGTTCCAATTTATTTATCTTTTCCTTTCCTGGTATA ATACTCTCAACATTTGGGAACGATCTTTTGATAAGCTACAAAAATAAGAT ATTTTCAAAGTAGAATACTATCTATGATATTAAATTATCAGTCAGATAAC TGCTCAAGATTTTAAAATTATGATTCTGTTTACACTTACAGTATCACTAC TGAAGATAAGTATGGTTCTGCACCCATCAATTCGGCCTGTGCAACTGACG AAGATGAGGAGTTTTTGAAATCCAATGAAACCATGACCTCGATGAAAGAT ATAACACCACCTAAACTCATACCAGCATCCACCTCATCAAGTAGCGGTCC CTCTAATCCCAGTATAGCCAAACAGTTGTATGCAGCTAGTCCTATCTTGA ATACACATTTAAAACCAATGGAGACCAAGAAAGAGGTGAAGTTAGATTCA AAGCTGGAATTTAATGATAGATCACAGATCAATGGACTGATCACAGCAGC AGAATCTAAAGCAGGTATGATTCTAAGTCAGATGAACATCATTGCTTGAT TATGGAATATCATTATCAAGTATCAAGTTTTTATAGCGGCAAAAATCTAG CTAATATTATTCTAAATTCCCTGCAACCTCTTGACCTCATATGACAGGTC AAAGTCAGTAGCTGTCACTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063039TCONS_00063039Clytia hemisphaericatranscript
TCONS_00063038TCONS_00063038Clytia hemisphaericatranscript
TCONS_00063037TCONS_00063037Clytia hemisphaericatranscript
TCONS_00063036TCONS_00063036Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063037-proteinTCONS_00063037-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_377supercontigscaffold_377:25852..31472 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.49 21.64 10.41 6.69 46.03 34.71 26.12 28.63 15.07 24.69 20.96 14.59 14.67 16.29 14.61 19.14 24.36 24.5 12.45 9.96 15.31 15.68 28.99 28.75 28.09 25.08 12.25 9.7 26.6 32.06