Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055429 ID=TCONS_00055429|Name=TCONS_00055429|organism=Clytia hemisphaerica|type=transcript|length=2475bp CAAAAGAGAAAATTCCTCCTTTATTCCAAATTTCTCATGTGGAACACACA TAACAACCTTTTCTAAAACCATTTCCTACTCAAATCACCAACCGAACACA TGAAAATATCAATCCACAACAACTCTCAACAACAGCTTAGAGATTGGAAA GATGTGGTGCTTCGTTTCAGAGCCCAATGGGACAATCCACGAGCTTATAC TACCTAAGGGAAGCTATGGGATTGATTGTCTTGATAtgATCTCGTCAAGA ATTAACCTTGTCGAAAAGGATTACTTTGGCTTGAAGTATACCAACCCATC AACTGGTGTCAATACATGGCTTAATCTCAGGAATAAACTATCACAACAGC TCACTGGGAGGGCTCCACATCGAATACAACTCACAGTGAAATATTTTGTT AATGTTCAAGAGCTTCAACAACAAATTTCAAgGGACATTTTTTATTCTAC AATCTACCAACAACTCTTAAATGAAGATTTATTGGACAAAATTGGTCAAC CTGAACTAAACAAAGTAATAGCTCTCATTGCACAAGTGAAATATGGAGAT TTCAATGCAGAATCAGTGCCAGAATACTCAAAACTGTTACCCTCAATCAA ATGGTCTAATGAATTACAAAAAAGCGTTGAAACTGAACATCTCAACCTTG ATATGGTGACCTCATCTGAAGCTAAAATccaattcatcaaaatttttggg gACCTTCCTAACTATGGAATGGATATTTTCCATGTGAATTCAGTAGCAGA ACATCCAGATCAACTTATTCTTGGTGTTCGTCATGATGGCCTCAGAATCT ACAAAGATAAATCAATTCTATCAGAAACTGAGCAAGAGAATTTAGTCCAA TTCATTCCTTATGATGAAATTTCAACTGTATCATATAAAGGCAAGAAGTT CACTATTGTGCATGGAAGTAACCAAGACGATCATGTTCATTCCACTTTTC TTTTGCGAGAGAGGCAGATTATACCTTTTTGATGTTGTTCGAACAAGACG TCAAGCATACGATCATGCCTGGTCAATATTGAATGCCCCTGATAAGAAAC GTCAATCAGCATTTTATCACAGTGACCGTCATATCAATCGAAAAAGTGTA TATAGTTTGAGTAAAGTTGACGAGGCTCCAGAGACTCACAGTAGAAGACC TCAGTCTCAAAGCTTTGAATCTATAACTTTCACGAAAGACCACAAAAAGA AAGAAGGTAGGCTGATTTCTGCAGATGCTAACGTTAAACAATTGTCTTTG GAGGAATTACGTGAAACTGTTGAAAATCTGTTGGAGAACAAAGTATGCCA AGTTTGCATGGATTCTGAAGTCTCCACTGCGTTTTGTCCTTGTGGCCATG TTGTATGTTGTGTGGATTGTGCAACTTTGTGTCGTGAATGTCCTCTATGT CGGATGCAAATCACTTATGCCCAAagagttttcttttcaaatgatTGAAA GCTACAGAAATTTATTGTGTTCATTCTTATTGTTAttgtctttataaaaa aaaaactaattctaGAAGCTTGTTGTAAATATGAAGTAGTGTAAATTTAT TATTTGTAAagtgttaaaatttttaataaaaatcctTAGTAGGGTATCCA GGTTTTAGCTGGGACCAATTTATTAAGATTCATTTTTAGTAAATATCGTG TTTTTTTAGTAATTTAACTGAAAgtagacagacagacagacagaaagACA GAGATAgagatgaaatttatttttcaaatttcatcagCTTTTTTTAGCTA ATGAATTATGTATGTGTATATTGAAAATGTTGGTCTATTTGATCGTAAAT TTCAGGATTGGATTCTTGAATGTTCTGTCAGTGTCGTCTTTGAAACttaa tgaaagatttatgaGCTTCAACACatgtagatttttttctctttttttcc gaTTCAGCTGAATTCAGTCGATACGAATTTATTTCTCAATTTGAGAAATA TAGCTGACTctcataaaaatttataaaatgacGTATTTCGGgcgttgttt ttcattttcaaagtagaTTTTGTTGGGTTTTTTATACTTAGATTctgaaa tttcccttttttcaaaatcaccCTTCTATTTCTAGTGGCctctttatctt tttttatggTCACTTAAgttcatagccctttttttgCAACagtagaaata attttttcattttctcttattttgaaaatttgtttttcccataaaattGT ACTTAGATAAATATTATTTCATACTTTTGCTTTTTTCCTCATTGTTACTC TCAAGTGCCTTAAAAGCTCCGGTTTTGCGATATTTATTAACTCATCTGAT TGGAGAAACTTTCACCTGTCAAAAGTGCATTTAAATAATTTGACTTCCTT CTTAGAATTTTGTTCTATCAAGGGAAAAAATACAGGGTATTGATGAAAGA CACTTGAGAGAATTCTTTTTCCTGCGTttcaaaatatcatattttcaaaa accgAAAAATAAAATCGAAACATTA Run BLAST on NCBI protein sequence of TCONS_00055429-protein >TCONS_00055429-protein ID=TCONS_00055429-protein|Name=TCONS_00055429-protein|organism=Clytia hemisphaerica|type=polypeptide|length=276bp
MWCFVSEPNGTIHELILPKGSYGIDCLDMISSRINLVEKDYFGLKYTNPS TGVNTWLNLRNKLSQQLTGRAPHRIQLTVKYFVNVQELQQQISRDIFYST IYQQLLNEDLLDKIGQPELNKVIALIAQVKYGDFNAESVPEYSKLLPSIK WSNELQKSVETEHLNLDMVTSSEAKIQFIKIFGDLPNYGMDIFHVNSVAE HPDQLILGVRHDGLRIYKDKSILSETEQENLVQFIPYDEISTVSYKGKKF TIVHGSNQDDHVHSTFLLRERQIIPF Run BLAST on NCBI transcript from alignment at scaffold_253:806574..810251+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055429 ID=TCONS_00055429|Name=TCONS_00055429|organism=Clytia hemisphaerica|type=transcript|length=3678bp|location=Sequence derived from alignment at scaffold_253:806574..810251+ (Clytia hemisphaerica) CAAAAGAGAAAATTCCTCCTTTATTCCAAATTTCTCATGTGGAACACACA
TAACAACCTTTTCTAAAACCATTTCCTACTCAAATCACCAACCGAACACA
TGAAAATATCAATCCACAACAACTCTCAACAACAGCTTAGAGATTGGAAA
GATGTGGTGCTTCGTTTCAGAGCCCAATGGGACAATCCACGAGCTTATAC
TACCTAAGGGAAGCTATGGGATTGATTGTCTTGATAtggtaagaaatatt
ttttcatagttTGTTGTTGTTATAACTTTATGATTCTGACCTTCTAATAT
TTTTGTTTGTGTTGTGTCTTGCTGTGAAAATCTCATAAGCAATGCATCTA
ATTTCTTTTTATCAGATCTCGTCAAGAATTAACCTTGTCGAAAAGGATTA
CTTTGGCTTGAAGTATACCAACCCATCAACTGGTGTCAATACATGGCTTA
ATCTCAGGAATAAACTATCACAACAGCTCACTGGGAGGGCTCCACATCGA
ATACAACTCACAGTGAAATATTTTGTTAATGTTCAAGAGCTTCAACAACA
AATTTCAAggtatttttcttgaaaattagaATTGGTAGTCCTATATCCCT
TTTCTTGTGAGTGTTAGAATTGAAGTGTTGCTTTTGTGTTGACTTTTTGT
GCCTGATCTGATTCgatattttttcttaaataaattCCTGCTTTAAAAGA
GCGGTTGTTGTTTGACAAGACTATTAAAACCATTTGTGACAATACATAcc
ttaagttggtctaatatcgacatccctcttctaatttcaacatccttctt
tagagataggaacaataggaaggtcagaatcactgatggactcctcaact
gattgcttagcaaaaaaaaataagtttcagcgattccaaccttcctatca
ttcatatctttaaagaaggatgtcgaaattagaaaatggatgtcgacatt
agaccaacttacggtacaaaACTAGTCATTtctattttccttttcaaaaa
tcatcaaaccaGAAAACTGGGAATTCTTATtcaaacctgaacataataac
aAAAGAATTCCGAACTGATGTAATCTTAATCTTATTTTTCAGGGACATTT
TTTATTCTACAATCTACCAACAACTCTTAAATGAAGATTTATTGGACAAA
ATTGGTCAACCTGAACTAAACAAAGTAATAGCTCTCATTGCACAAGTGAA
ATATGGAGATTTCAATGCAGAATCAGTGCCAGAATACTCAAAACTGTTAC
CCTCAATCAAATGGTCTAATGAATTACAAAAAAGCGTTGAAACTGAACAT
CTCAACCTTGATATGGTGACCTCATCTGAAGCTAAAATccaattcatcaa
aatttttggggACCTTCCTAACTATGGAATGGATATTTTCCATGTGAATT
CAGTAGCAGAACATCCAGATCAACTTATTCTTGGTGTTCGTCATGATGGC
CTCAGAATCTACAAAGATAAATCAATTCTATCAGAAACTGAGCAAGAGAA
TTTAGTCCAATTGTAagtattttaaattaaaaacttGAATAGTTAATTTT
GACATTTAAACgtcttttaaaattcaaaattatgaATCGCCTTTTGGTGC
CTTGAACTCAGGGAACTCAGGGAActcatttttgtcatttttactTTGAC
TACACCAGAAAAATTAGAACCTGTGAATTACAAATTtggttgtttttctt
caaaaaacctgaaaaatccttcttaggaaaatgaaagaaatgtgtcAAAC
AGTGTCAAATAGTGCAAAACTGCGGAAATTAATTTCCACCAAATGCGAac
gtttggaattttttttgaccaagaaaattagttcccttttaGGTACATGA
CAAATTTTACAAGGTTCTCAGAAGAATTTTTCGAATAATTAGTTTTATTT
TCTTACTTTCAGCATTCCTTATGATGAAATTTCAACTGTATCATATAAAG
GCAAGAAGTTCACTATTGTGCATGGAAGTAACCAAGACGATCATGTTCAT
TCCACTTTTCTTTTGCGTAAGAATCAACAAGCAATCAATCTTTTCAGGAC
ATTTACAGAGTTTCATTCATTCTATCAATGCAACAGTGTTAAAAAATCGG
TAATTGAGAAATGTTCCAGGACCTCAGTAGCAAGAATCCTTTCGGTCTTT
TCACGTCAGGAGAGAGGCAGATTATACCTTTTTGATGTTGTTCGAACAAG
ACGTCAAGCATACGATCATGCCTGGTCAATATTGAATGCCCCTGATAAGA
AACGTCAATCAGCATTTTATCACAGTGACCGTCATATCAATCGAAAAAGT
GTATATAGTTTGAGTAAAGTTGACGAGGCTCCAGAGACTCACAGTAGAAG
ACCTCAGTCTCAAAGCTTTGAATCTATAACTTTCACGAAAGACCACAAAA
AGAAAGAAGGTAGGCTGATTTCTGCAGATGCTAACGTTAAACAATTGTCT
TTGGAGGAATTACGTGAAACTGTTGAAAATCTGTTGGAGAACAAAGTATG
CCAAGTTTGCATGGATTCTGAAGTCTCCACTGCGTTTTGTCCTTGTGGCC
ATGTTGTATGTTGTGTGGATTGTGCAACTTTGTGTCGTGAATGTCCTCTA
TGTCGGATGCAAATCACTTATGCCCAAagagttttcttttcaaatgatTG
AAAGCTACAGAAATTTATTGTGTTCATTCTTATTGTTAttgtctttataa
aaaaaaaactaattctaGAAGCTTGTTGTAAATATGAAGTAGTGTAAATT
TATTATTTGTAAagtgttaaaatttttaataaaaatcctTAGTAGGGTAT
CCAGGTTTTAGCTGGGACCAATTTATTAAGATTCATTTTTAGTAAATATC
GTGTTTTTTTAGTAATTTAACTGAAAgtagacagacagacagacagaaag
ACAGAGATAgagatgaaatttatttttcaaatttcatcagCTTTTTTTAG
CTAATGAATTATGTATGTGTATATTGAAAATGTTGGTCTATTTGATCGTA
AATTTCAGGATTGGATTCTTGAATGTTCTGTCAGTGTCGTCTTTGAAACt
taatgaaagatttatgaGCTTCAACACatgtagatttttttctctttttt
tccgaTTCAGCTGAATTCAGTCGATACGAATTTATTTCTCAATTTGAGAA
ATATAGCTGACTctcataaaaatttataaaatgacGTATTTCGGgcgttg
tttttcattttcaaagtagaTTTTGTTGGGTTTTTTATACTTAGATTctg
aaatttcccttttttcaaaatcaccCTTCTATTTCTAGTGGCctctttat
ctttttttatggTCACTTAAgttcatagccctttttttgCAACagtagaa
ataattttttcattttctcttattttgaaaatttgtttttcccataaaat
tGTACTTAGATAAATATTATTTCATACTTTTGCTTTTTTCCTCATTGTTA
CTCTCAAGTGCCTTAAAAGCTCCGGTTTTGCGATATTTATTAACTCATCT
GATTGGAGAAACTTTCACCTGTCAAAAGTGCATTTAAATAATTTGACTTC
CTTCTTAGAATTTTGTTCTATCAAGGGAAAAAATACAGGGTATTGATGAA
AGACACTTGAGAGAATTCTTTTTCCTGCGTttcaaaatatcatattttca
aaaaccgAAAAATAAAATCGAAACATTA Coding sequence (CDS) from alignment at scaffold_253:806574..810251+ >TCONS_00055429 ID=TCONS_00055429|Name=TCONS_00055429|organism=Clytia hemisphaerica|type=CDS|length=4155bp|location=Sequence derived from alignment at scaffold_253:806574..810251+ (Clytia hemisphaerica) ATGTGGTGCTTCGTTTCAGAGCCCAATGGGACAATCCACGAGCTTATACT ACCTAAGGGAAGCTATGGGATTGATTGTCTTGATAtgATCTCGTCAAGAA TTAACCTTGTCGAAAAGGATTACTTTGGCTTGAAGTATACCAACCCATCA ACTGGTGTCAATACATGGCTTAATCTCAGGAATAAACTATCACAACAGCT CACTGGGAGGGCTCCACATCGAATACAACTCACAGTGAAATATTTTGTTA ATGTTCAAGAGCTTCAACAACAAATTTCAAgGGACATTTTTTATTCTACA ATCTACCAACAACTCTTAAATGAAGATTTATTGGACAAAATTGGTCAACC TGAACTAAACAAAGTAATAGCTCTCATTGCACAAGTGAAATATGGAGATT TCAATGCAGAATCAGTGCCAGAATACTCAAAACTGTTACCCTCAATCAAA TGGTCTAATGAATTACAAAAAAGCGTTGAAACTGAACATCTCAACCTTGA TATGGTGACCTCATCTGAAGCTAAAATccaattcatcaaaatttttgggg ACCTTCCTAACTATGGAATGGATATTTTCCATGTGAATTCAGTAGCAGAA CATCCAGATCAACTTATTCTTGGTGTTCGTCATGATGGCCTCAGAATCTA CAAAGATAAATCAATTCTATCAGAAACTGAGCAAGAGAATTTAGTCCAAT TCATTCCTTATGATGAAATTTCAACTGTATCATATAAAGGCAAGAAGTTC ACTATTGTGCATGGAAGTAACCAAGACGATCATGTTCATTCCACTTTTCT TTTGCGAGAGAGGCAGATTATACCTTTTTGAATGTGGTGCTTCGTTTCAG AGCCCAATGGGACAATCCACGAGCTTATACTACCTAAGGGAAGCTATGGG ATTGATTGTCTTGATAtgATCTCGTCAAGAATTAACCTTGTCGAAAAGGA TTACTTTGGCTTGAAGTATACCAACCCATCAACTGGTGTCAATACATGGC TTAATCTCAGGAATAAACTATCACAACAGCTCACTGGGAGGGCTCCACAT CGAATACAACTCACAGTGAAATATTTTGTTAATGTTCAAGAGCTTCAACA ACAAATTTCAAgGGACATTTTTTATTCTACAATCTACCAACAACTCTTAA ATGAAGATTTATTGGACAAAATTGGTCAACCTGAACTAAACAAAGTAATA GCTCTCATTGCACAAGTGAAATATGGAGATTTCAATGCAGAATCAGTGCC AGAATACTCAAAACTGTTACCCTCAATCAAATGGTCTAATGAATTACAAA AAAGCGTTGAAACTGAACATCTCAACCTTGATATGGTGACCTCATCTGAA GCTAAAATccaattcatcaaaatttttggggACCTTCCTAACTATGGAAT GGATATTTTCCATGTGAATTCAGTAGCAGAACATCCAGATCAACTTATTC TTGGTGTTCGTCATGATGGCCTCAGAATCTACAAAGATAAATCAATTCTA TCAGAAACTGAGCAAGAGAATTTAGTCCAATTCATTCCTTATGATGAAAT TTCAACTGTATCATATAAAGGCAAGAAGTTCACTATTGTGCATGGAAGTA ACCAAGACGATCATGTTCATTCCACTTTTCTTTTGCGAGAGAGGCAGATT ATACCTTTTTGAATGTGGTGCTTCGTTTCAGAGCCCAATGGGACAATCCA CGAGCTTATACTACCTAAGGGAAGCTATGGGATTGATTGTCTTGATAtgA TCTCGTCAAGAATTAACCTTGTCGAAAAGGATTACTTTGGCTTGAAGTAT ACCAACCCATCAACTGGTGTCAATACATGGCTTAATCTCAGGAATAAACT ATCACAACAGCTCACTGGGAGGGCTCCACATCGAATACAACTCACAGTGA AATATTTTGTTAATGTTCAAGAGCTTCAACAACAAATTTCAAgGGACATT TTTTATTCTACAATCTACCAACAACTCTTAAATGAAGATTTATTGGACAA AATTGGTCAACCTGAACTAAACAAAGTAATAGCTCTCATTGCACAAGTGA AATATGGAGATTTCAATGCAGAATCAGTGCCAGAATACTCAAAACTGTTA CCCTCAATCAAATGGTCTAATGAATTACAAAAAAGCGTTGAAACTGAACA TCTCAACCTTGATATGGTGACCTCATCTGAAGCTAAAATccaattcatca aaatttttggggACCTTCCTAACTATGGAATGGATATTTTCCATGTGAAT TCAGTAGCAGAACATCCAGATCAACTTATTCTTGGTGTTCGTCATGATGG CCTCAGAATCTACAAAGATAAATCAATTCTATCAGAAACTGAGCAAGAGA ATTTAGTCCAATTCATTCCTTATGATGAAATTTCAACTGTATCATATAAA GGCAAGAAGTTCACTATTGTGCATGGAAGTAACCAAGACGATCATGTTCA TTCCACTTTTCTTTTGCGAGAGAGGCAGATTATACCTTTTTGAATGTGGT GCTTCGTTTCAGAGCCCAATGGGACAATCCACGAGCTTATACTACCTAAG GGAAGCTATGGGATTGATTGTCTTGATAtgATCTCGTCAAGAATTAACCT TGTCGAAAAGGATTACTTTGGCTTGAAGTATACCAACCCATCAACTGGTG TCAATACATGGCTTAATCTCAGGAATAAACTATCACAACAGCTCACTGGG AGGGCTCCACATCGAATACAACTCACAGTGAAATATTTTGTTAATGTTCA AGAGCTTCAACAACAAATTTCAAgGGACATTTTTTATTCTACAATCTACC AACAACTCTTAAATGAAGATTTATTGGACAAAATTGGTCAACCTGAACTA AACAAAGTAATAGCTCTCATTGCACAAGTGAAATATGGAGATTTCAATGC AGAATCAGTGCCAGAATACTCAAAACTGTTACCCTCAATCAAATGGTCTA ATGAATTACAAAAAAGCGTTGAAACTGAACATCTCAACCTTGATATGGTG ACCTCATCTGAAGCTAAAATccaattcatcaaaatttttggggACCTTCC TAACTATGGAATGGATATTTTCCATGTGAATTCAGTAGCAGAACATCCAG ATCAACTTATTCTTGGTGTTCGTCATGATGGCCTCAGAATCTACAAAGAT AAATCAATTCTATCAGAAACTGAGCAAGAGAATTTAGTCCAATTCATTCC TTATGATGAAATTTCAACTGTATCATATAAAGGCAAGAAGTTCACTATTG TGCATGGAAGTAACCAAGACGATCATGTTCATTCCACTTTTCTTTTGCGA GAGAGGCAGATTATACCTTTTTGAATGTGGTGCTTCGTTTCAGAGCCCAA TGGGACAATCCACGAGCTTATACTACCTAAGGGAAGCTATGGGATTGATT GTCTTGATAtgATCTCGTCAAGAATTAACCTTGTCGAAAAGGATTACTTT GGCTTGAAGTATACCAACCCATCAACTGGTGTCAATACATGGCTTAATCT CAGGAATAAACTATCACAACAGCTCACTGGGAGGGCTCCACATCGAATAC AACTCACAGTGAAATATTTTGTTAATGTTCAAGAGCTTCAACAACAAATT TCAAgGGACATTTTTTATTCTACAATCTACCAACAACTCTTAAATGAAGA TTTATTGGACAAAATTGGTCAACCTGAACTAAACAAAGTAATAGCTCTCA TTGCACAAGTGAAATATGGAGATTTCAATGCAGAATCAGTGCCAGAATAC TCAAAACTGTTACCCTCAATCAAATGGTCTAATGAATTACAAAAAAGCGT TGAAACTGAACATCTCAACCTTGATATGGTGACCTCATCTGAAGCTAAAA TccaattcatcaaaatttttggggACCTTCCTAACTATGGAATGGATATT TTCCATGTGAATTCAGTAGCAGAACATCCAGATCAACTTATTCTTGGTGT TCGTCATGATGGCCTCAGAATCTACAAAGATAAATCAATTCTATCAGAAA CTGAGCAAGAGAATTTAGTCCAATTCATTCCTTATGATGAAATTTCAACT GTATCATATAAAGGCAAGAAGTTCACTATTGTGCATGGAAGTAACCAAGA CGATCATGTTCATTCCACTTTTCTTTTGCGAGAGAGGCAGATTATACCTT TTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00055429-exon-scaffold_253-1491911889:806574..806811 | TCONS_00055429-exon-scaffold_253-1491911889:806574..806811 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1510915933:806574..806811 | TCONS_00055429-exon-scaffold_253-1510915933:806574..806811 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1575043694:806574..806811 | TCONS_00055429-exon-scaffold_253-1575043694:806574..806811 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1491911889:806939..807132 | TCONS_00055429-exon-scaffold_253-1491911889:806939..807132 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1510915933:806939..807132 | TCONS_00055429-exon-scaffold_253-1510915933:806939..807132 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1575043694:806939..807132 | TCONS_00055429-exon-scaffold_253-1575043694:806939..807132 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1491911889:807666..808085 | TCONS_00055429-exon-scaffold_253-1491911889:807666..808085 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1510915933:807666..808085 | TCONS_00055429-exon-scaffold_253-1510915933:807666..808085 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1575043694:807666..808085 | TCONS_00055429-exon-scaffold_253-1575043694:807666..808085 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1491911889:808486..808589 | TCONS_00055429-exon-scaffold_253-1491911889:808486..808589 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1510915933:808486..808589 | TCONS_00055429-exon-scaffold_253-1510915933:808486..808589 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1575043694:808486..808589 | TCONS_00055429-exon-scaffold_253-1575043694:808486..808589 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1491911889:808733..810251 | TCONS_00055429-exon-scaffold_253-1491911889:808733..810251 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1510915933:808733..810251 | TCONS_00055429-exon-scaffold_253-1510915933:808733..810251 | Clytia hemisphaerica | exon |
TCONS_00055429-exon-scaffold_253-1575043694:808733..810251 | TCONS_00055429-exon-scaffold_253-1575043694:808733..810251 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_253 | supercontig | scaffold_253:806574..810251 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
Term | Definition |
GO:0005856 | cytoskeleton |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
cellular_component |
GO:0005856 |
cytoskeleton |
Blast
BLAST of TCONS_00055429 vs. Swiss-Prot (Human)
Match: MYLIP (E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 8.104e-33 Identity = 76/220 (34.55%), Postives = 128/220 (58.18%), Query Frame = 2 Query: 152 MWCFVSEPNGTIHELILPKGSYGIDCLDMISSRINLVEKDYFGLKYTNPSTGVNTWLNLRNKLSQQLTGRAPHRIQLTVKYFVNVQELQQQISRDIFYSTIYQQLLNEDLLDKIGQP-ELNKVIALIAQVKYGDFNAESVPEYSKLLPSIKWSNELQKSVETEHLNLDMVTSSEAKIQFIKIFGDLPNYGMDIFHVNSVAEHPDQLILGVRHDGLRIYKD 808
M C+V+ P+ + E+ + + G DCL+ + R+ ++E DYFGL++T S G + WLNLRN++SQQ+ G AP+R++L VK+FV + Q+ +R IF+ I + LL LL Q EL+ AL+AQ K+GD+N + + L + + S+ S+ +H L+ + + A+ Q ++I + NYG++ V +L++GV +G+ I KD
Sbjct: 1 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTG-SKGESLWLNLRNRISQQMDGLAPYRLKLRVKFFVEPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVELS---ALLAQTKFGDYNQNTAKYNYEELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQIVSAMENYGIEWHSVRD--SEGQKLLIGVGPEGISICKD 214
The following BLAST results are available for this feature:
|