XLOC_034876 (gene) - C. hemisphaerica

Overview
NameXLOC_034876
Unique NameXLOC_034876
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:694672..702014+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034876 ID=XLOC_034876|Name=XLOC_034876|organism=Clytia hemisphaerica|type=gene|length=7343bp|location=Sequence derived from alignment at scaffold_253:694672..702014+ (Clytia hemisphaerica)
cttcagaGAAACAcatcacaaaaataaaaaaatacaaaccGGACGGTTAA
TATAAAGACAGAATATGTTACACGATTTCAAGTAAGTATTGGATTCAGAA
CCGCACGATTGGAAAGCCGTTTTCCGTGCGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtaaggtgtcacaaaaattga
cacttttccaatacaaatttattttttatgtcaaatatatcgtttaaacc
gtaatttattgaatatttaagataaaataagcaatttgaaatttaaaaat
ttttggtttttgctcactttgcgcatgatgagtgacgtcatcagaaaaat
ttttcgtcaaaagttaccttatgtgacaaggatcttgtttgccaaatttc
atccaaaaagacccactagatcaaaagttaatgggtggtacaggaaaagc
cccccccccttagttctgaaccgcccctaaatacctaggttgaatagggt
taaagagaTTTCGTGTCACCTATAACCATTAGCTTGTAGCAAACATTATC
TAAAGGATTGAACAGAAAGACAGTTTAAGATCAATCACTGGTGCCCTAAT
CACTGTATCGGTTTTTACCGTGTGTTCCGGTAATGTTTTGTTAAGATTCG
AATATTTGCATAACTTAACAAAACCTTTATTAGAGGCGTGTGAAGTGTAC
CCGGAACTTTCTTTATTACAGAGCgtcattttattaaaagacTTATAATA
GAACTCATCGTCCCTGCTTACTTTATATTTACACACGATGAAATTatatc
actttcactttcttcttcTAAATTTAGGACAGCACAACCGATCGAATTCT
ACAAACACTTCTTGGTATtctttaaaatctttattttacGCACTATGGTT
TAAGTTCCCTCTTTCGTTTCTGAGACACCCAGTGCTACCttaaagggaac
taattttggcgaattcggcGAAAAACTCGGTTctttccaaattgaaatat
tgctGGCTCAAAATTTACCACTAATTTTCtctaaaacacaaattttcagg
caaaaagaaACTGATTCACCCTGtctttcgccaaaattagttctcaccGA
GTTAGATAATTGCTttaaaataagttctcgccaaatttaatgcCAAATTA
GTTCTCTGAAGgtaatattttttatcaataaactATTGTTTTTGTGCCAA
CAATTGTAAATTTCTGCTCGAACATGTTGCTATAAATGCTTTTATGTTCA
TGTATTACTTGTTCATTCTCGtgatttacagaaagaaaacgTCAGACCTG
ATGGAAGAGAATTACTTAAGTTTCGAGATGCGCTGTTAAACATCGGTAAG
TTAAAAAGACCTCGTAATACAAATTATAATTGCGTTATGCGTAGGAAATG
GGCCCCAAAAACCTTCTCTATCTCCAAAAACCTTCTGAAACCCCATCGTA
GAATCGTAGCTCGCTCAAATTGTTCGCACTCCACGTGCATACATACTTAC
TTTGactctttcattctttcattttcattctaTAGGATCAATCAACACAG
CACGTGGGTCGGCTTTGGTTCGTCTTGGTCACACAATGGTCATTTGCGGT
ATAAGTGCAGTAAGTTAATATGTTGTTGTAACACATTTTGTTTCGACCCC
TTGCATATTAATGGTACTCTTATATAAATGTATAATTCAATGTCATAAGT
Agctcttttttttgaaatcagatatctgaacaatttttgaaaagtaaaac
gctaaaattattCAATTTGACATTTTGTTTACACTTCTATCAGATTTTAC
TTGAAATTATGTTAAAATACATGGACTTGTTATAATCGTGATTTTAAATT
ATTATGTCAATGAATTTCAGGAATTAGCAGAACCAAAAGCGACCACACCA
GACAAAGGATTTTTTGGTAAGGtttgatttttgtatttcaTAGAAAAAGA
TAATTCAAATATATCACAAttggtttttttttataaattcggCTTTTATT
GTACATAAAAAGCTCAATATTAAATACATATTAAATAGGTCGTGTCCGGC
ATTATAAACTTAGGATGTCTGCAAATAGGAAATTTTCAAGGAATATTCGT
TTTCACCATAGTTCCAAATGTAGACCTTCCACCTTCTTGTTCGAATAAAT
ACAGACCTGGCCCTCCATCTGATGATGCGCAGATTCTTTCACAATTCGTC
CTTGATGTTGCTACTAAGTATTCATATcccttttttttaatcttttctaC
GTTTTTCAATTGTGCGTTGTGGGGTATCTAGCTTGACTGGTTGGCAAGGA
GGATACcctaaaacattaaaaaaagagGTTTAATTTATAGTTGGGGNGGG
GTCTCTAGTGGTTTTCAACCttattttaaatgattttgaCCCCCGGTGGT
ATTCAGATTTGCGAGCTGATGAACTATGCCGGAATAAAACTCTAACCCCC
GGTTTTTAAGCTGGTTgtcttttttcaaataatatatTTTGAACTTTGAA
TGTAAGCTTCTAGTGACTTTTGGAAGCTTCAACTTTGTTTTAATCTatcg
attttattttttagctcAGAAGTATTAAAGCTAGAGAATCTATGTATTGC
TACAAAAAAGGTTAGTAGATCATTTTAATGTGTTTATTTACTGCCTTGCA
TTTAAAAACCCAAAAGAATAAATTTCAGCCTTTTGttcttttgatgaaaa
aatatacaGATATTCTCAGTTAATACAGCTCGCCGACCAGAATCTCTATT
CACTTCAAATATGTATTAAAACATTTGTTTTTCGTTCTAATTTCAGTTAG
CGTGGGTGATATATGCAGATATTCAATGTATAAGTCACGATGGAAATCTA
AAAGATGCAATCATTGCTGCGCTATACGCTGCCTTGCGAAACAGTGAGTG
AAGTCGAGTCTTTatttaattcgaagaaaattcctggtcccttgaaaatc
gaattaaagagagagtGATTGTATTtcgtttcaaaaaatattgaatgtcg
atttttacttttttttttctaaagtcaCCCCTGATTCTTTATCTGTGCTG
CTCATTGGTGTTACTTGCTTAAAAACTTTCTTTACTTTTTCAGCCAAACT
TCCGACCGTTGAATACAACGAAGAAACAGCAGACGTTCAAGNAAAAAAAG
AGGTTTAATTTATAGTTGgggcccgggggggtactacccttgtcgaccga
cgggggtgctccgctgaggttcgaaaaatggaccctacgtgggactcgaa
atttgcgaaaaaaagtgaccctgaNTGGAAGCTTCAACTTTGTTTTAATC
TatcgattttattttttagctcAGAAGTATTAAAGCTAGAGAATCTATGT
ATTGCTACAAAAAAGGTTAGTAGATCATTTTAATGTGTTTATTTACTGCC
TTGCATTTAAAAACCCAAAAGAATAAATTTCAGCCTTTTGttcttttgat
gaaaaaatatacaGATATTCTCAGTTAATACAGCTCGCCGACCAGAATCT
CTATTCACTTCAAATATGTATTAAAACATTTGTTTTTCGTTCTAATTTCA
GTTAGCGTGGGTGATATATGCAGATATTCAATGTATAAGTCACGATGGAA
ATCTAAAAGATGCAATCATTGCTGCGCTATACGCTGCCTTGCGAAACAGT
GAGTGAAGTCGAGTCTTTatttaattcgaagaaaattcctggtcccttga
aaatcgaattaaagagagagtGATTGTATTtcgtttcaaaaaatattgaa
tgtcgatttttacttttttttttctaaagtcaCCCCTGATTCTTTATCTG
TGCTGCTCATTGGTGTTACTTGCTTAAAAACTTTCTTTACTTTTTCAGCC
AAACTTCCGACCGTTGAATACAACGAAGAAACAGCAGACGTTCAAGTCAA
ACAAGACCAACTTTTTCAACTTCCCATTCAAACGTGCCCTGTTTCTTCAA
CTTTTGCTCTCTTTCAAGAGTTAGTGTTTCAAACTTTTAGTTCGTTCTAC
AAACCATGCAAATGAACGAGATGAACAAAAAATCTCTACCTAACGATACA
ATTATTGAATGCTTGACTTGAGTGATGATATTGATTTGTCTGCACAGTAA
CCAGCCGAACTTATTGATGCTTTTTGCTCTATTATTTCAATCGAAGAAGT
TTCTGTTAggtttccaggttttccctaaAAGTTTACTTCTGCTGGTGATA
TTTACTACagttactttttggacctacctccgggtgccccggtggaggtc
ctatgaattaacctctgtctgttcgtccgttcgttcgttcgttcgttcgt
tcgtctgttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNatcatcaggtaggtccattcagcatgttgct
tgttttgtagattttttttcgatattcttatttaTCTACGGATGTGATGT
CCCGTCAAGTTTCCTTTTTGCACTTTCAGTGAAATCTTACTCGCTGACCC
GAccaacgaagaagaagaaataagCAATGGAACGATCACTATCGTTGTCA
ACAGTGAAGGGAAACTTTGCATGGTCAGCAAACCAGGTATCTTAGATATG
TTATATTCGAAATTCTTTGCATTTTATCTGACGTGATATATCAAATCGAG
AAATCGAAGATGGTCTGACATTGCCACTTCTTCGATACAGCTATGCCTTT
GGGAAATAATTATATAGGATCCCTATCTAAAACTGCAAGGTGTATGTATA
GTCTTTGCAATGTCGACAGTGTCATTTTCTCTAGTCCAGTCTTTTCAGTA
ATATTCCTTCATAATGAGTTTGAACGGTTTCTTTCCTAACTATCGACGAT
ATGCAATCCGTTATATTTCTAATCATATCTAACATGATATAaactttcta
aactttctaaAGTTTCTTTCTGTAAAGTCAGACATTGGACAGAGTGACAC
CTGTTCGAAGGTGAAATCATTCTCAACCTCaatataccttattacacgaa
tattactaggcaagtattcaacggccttgaaatttcgacgatctgaaatt
aacacgaatttttctgctttttcaaggaaacatcggctggttttaattaa
gggagtttttattaacacgaaattatTCAATTCGTGTTTATAAAAtgaat
agtaatatttgtgtaataaggtaatgCAATACTAAATTGAATACCTCTAA
ACACCTCTAATATTCAGGTGGAGCGGAGATGAAGGAGGAGAAACTAAAAG
TATGTATTCGAACGGCCTTGAAAAGACACGCGGAGGTGTTGAGCTTGGTC
ACTACAGCTCTTGGTGAAGATGAACCTGTAAGGTAACTCTTTATTACGAA
CGGGAATCTATTTGTTGGGTCACGCCAATATTGTTCAGCTGGTATCGATG
CTGAAAGGGTAATTTCAAATCACAAACACTACCCATAAAGAACTAAAATG
AGTAAACACCGTTTTGGAGTGGTGTTTCGCTCTAATCAGAGACGATTTAT
GAGACATATATTTTGGTAACCATATCATATTAAATCGATTTgttaaagca
aagaaaattaatgaaattgaaattatcgATGGCTTGTTTTGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055417TCONS_00055417Clytia hemisphaericatranscript
TCONS_00055418TCONS_00055418Clytia hemisphaericatranscript
TCONS_00055419TCONS_00055419Clytia hemisphaericatranscript
TCONS_00055420TCONS_00055420Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055420-proteinTCONS_00055420-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:694672..702014 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EXOSC8exosome complex component RRP43 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
96.4	89.93	56.39	47.66	22.08	15.9	22.46	22.57	22.61	23.26	18.53	18.78	14.7	15.27	18.14	21.23	22	29.83	6.94	7.49	16.98	14.93	49.02	39.95	25.98	23.97	9.85	7.3	23.63	27.27