XLOC_030066 (gene) - C. hemisphaerica

Overview
NameXLOC_030066
Unique NameXLOC_030066
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_123:57464..66929+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030066 ID=XLOC_030066|Name=XLOC_030066|organism=Clytia hemisphaerica|type=gene|length=9466bp|location=Sequence derived from alignment at scaffold_123:57464..66929+ (Clytia hemisphaerica)
gtttttaatttaattttgagaaacaaattgttttaattgttttgtttaca tttgataTACAAAGGATCATTGAACTTTTATTGAATCTCAGACAAAAAGT TCTTCCATTTGAAAGACCTTCAGCACAATTCTTAAGGTGAAAACCACTCA AGCGTACCATatctcatcaattattcatAACccattcaaattttcaataa tgTAAAATTACAATTCGGCATATTCTTAAGACGTAGAACAAGAAAGTTTA GATTCCTTTTAATTAACTTTAATTGGATGAAGAATTAACCCAATTTAGgg gttcaaattaaaaaaaaatgaggcTTAGGCTGCTAGTATTATTACTAGCC CTAGCTTTATGCTTGACAAATGCAAAACCACTGACGGATACCCAAACAGA GGAAAGTCCCGATGGTATGttcaatttttattgttttgcttctttttcat ttataacTGACTGGTTTCAGCAAAGTTGTTTTTCTAGGGTAATATTTATT CCtgagaaatttttcttgaaagcaTTCCTAATAAAGTCTTTTCTCTTGAT AGttgatttttttcgtttttctctTAATTGTATTTGCATACAGATTCCAT TAAATCATGAGTTTTGAGCTTGTGGACAACGCACTTTTTCGTTGTTTGAA TTTTCGGTTGGCTAATAAATGCTGAAACTTGCCAGAAAATTATCTTTAAT TGTATCAGAAAGAACCGAgaatagattttaaaattgGACTTCGTTTCCTC CGAAAGCTTAAGTTAACCAAGATCAAATACCAAGCTTCTCCAAAAACCTT CTTATAAATTCCCTGGTTATTTCATCTTCTATTCACACATTACAGCAACT CCAGAGAAGAAAGACAATACTCCTGAACCAAACACTGAACAATCACCAGA TGAAGACCAAAAGTCAACAGAAGAGGTTGATCAACCTTCTTCATCAGAGA AAGAAACATCTACTGAATCACAACCAGAAGAAGCTTCAGAATCTGAATCC ACCAAGGAGGTAGAAGAATCGAATGATGATACTACTGAAGGTGCCAAGAA GACTGAAGTCCCTAATAaggtatttttcttttcttatacaAGTTTGTTGC CAATCTATTGGCATTTTTAAAATCTATGGCTCAAACATGAGGTTTGAAGT ACTCACAATTTAGTTAAGCACGAGAATGTTAAAAAAAGACTTTCGAATTC TGTTTGATTATCTGTTTCATTACAACACTCTAAGTTGAACCGTTTATGGA TTTAGAAAATCACACTGTTATACAAAATATCCAGTCATGGCATAGTACAG TTTGTCGGAAAGATATATTCTACAAAGAAATACACCAGCAAACATTAAAT AGTTTTCATGTTTTAAGTAACTAGATGATTTTCGTCCTGAACAAGATGAT aggcaaaaaattttctttcttttccacaAATGGAATGCAGTCAACGGAGT TGAtgagaaaaaaactgaatttcggTTTTCTGAAAATACTTTTTGTTAAT AGTTAGTAGTTTTTTCACGTAACCTTTCCCCATGAAAACAGCTCTGTTGG CTGCTTTTGATCAAACTTGcatgtttttatcaaatgatgTATATCAATTT GCTGTCCAAAAAAAGCCAATTTTTATGGTGAAAGAATCCTGAAGATTATC CTTTATTGATCTGGAATGTTCTTAGTTCCCGACCGAATAAGGTACGTGCT TTTCAAAAGCAGCAGTCAACACGGGTTGTTTTTAATGAGAAAGGGCTGTC TCTATCACACAAacaatttgaaagttttaataatAATTACAAGTCTCAAA GTTTTATTGGGCACAGGCTTTCTCGTAAAGACAGCTCTGTTGATTGCTga ccttttgtttcttttcacttttttttctaatttctgaaaattttgatcAG TTCTTTAAATAACCTATTTACCTTTCAACCATTGCACAAAAAGGTTGCAT GAAAAAAGGTTCTACCGAGGGTCGAATAACGTTAAACGGAGTATCATTGC TTTGCGTTAACGGAGTCGGTAGTACTGACATTTGACGTCATCGACCCTTG TAAATTGCTCACACTTATTTCAAGTGTCTTGTTGCTTTTTTACTCCTTTG GTGATTATCGAACGCCGTTGAACGCCATGAACTTGTACTATTAGACAAAA TTCTTATCTTAACTTATCTGCTGCATTTTACGCACATTTACTTAATTTAC ATTTACTTCATAGCGGAACCAATCTAACCCCAGTTCTTTTATCGcattct cttttttttcatttttagaaaccgaagaagaagaagaaatcttccaaaag caaGAAAACAAAATCCAAAGCCAAATCTACTAAAGAAATAGACCGTCGAT ATGGTATGGGCGGTTATGGCGGTGGTATGGGCGGACATCATATGGGTGGA CATCACATGGGTGGACACCACATGGGACATCACGGTCACCATGGACACCA TGATCACGATCACGGACATGAGCATTATGAAGAATGGGATCACCATGGAG AGCATGGAGACCACCACGGTGGAGGACACGGACATCACCACGGTCACCAT GGACACCACGATCACCACGATCATGGTCACCATCATGGTTTCCACCACGA TTGGCATCATGATCATGGAGGTCATCATGGTGGACATCACGGTCATGGAG GTGGAGGAATGATGGGAGGTGGAGGATACCGTCGTGATGAGCTGACTGCT AACAAGAGGTTTTTCATGCCATTCAGTCCTTTCAGTGGAGGAAATCCTGG ACCCTTCAATGAGGGAATAGTTGATGTTTTTAACATGAATCCACTTCAAT GGCCCAACCCCTGGACACGAAATTGGATCGGTGCTAACGAAGGAGGACCA CCTGTCTCTGGTGTCTTCAACACACAATACCAAATACCCGCACTTCCTGT TGTAGCCGCTTTGAATTCAGGATTACTAAGCAATTCAGCGGGATCATGGG AAAGTCCGGCAGTGTTGGCTGGTAGCAGAAGATCATTAAAGAGCACTGGA TGTCAACCAGGAGATTCTGGTAAACGTGGATGCGGATGTGCTGGTAATCA TGAGAAATGCGGTGGACAGGGATACAGCGGTGGGTTTGGTTTGAACCACG GTGATCATTATGATGATGGCTTCCACGGTGGCCTACATTTCCCACTTGGT GGATGGTATGGTTGGGGTGCATGGCCATGGGGCACTTACGGTGATTTTGT CGGCCACCATGGTAATGCTGTACCATGTGATGTACCACACCACGAACATC ATTTAGATAACAACAGTGGTTATGATGAAGGTGAAGGACGAGTTGGTCAT ACCGGTGGCTACGGTGGTGGTGAATACAGCGGGCATCACGGTGATTGTGG TCACGGACACGGCGGTTGTGGAGGTCATGATGGACACCATGGATCAGGAT ACGGTGGATATGCAGGTCATCACGGTGGTCACGGCAGCTACGGAGGAGTT GGAACACAAAGCGGACACGGTCATCACGGAGGTGGTCATGGTCACGGCGG CTACGGTAACCACGGAAGTTACGGCGGCCATGGACACGGACATTGTAGAA GTCAAATTCCTAAAAGCACAATCGATAAACCATTCTTACCAATGTCAGCT GTTATGGAAGACTTTTAGATCAATCAAATAATAATAGCCAATAAACACTA TTTATATAACCGTCatagtattttttcattgattAATATTTAATCTTTTG TCATCCTGTGTTTCGTCTTGTAAATATTCTAGCATCcattattcaaaaag aaaagaagtatGTTTTTGTTAATTATTTTTGAACACGTTTTGATTCGGAC AGAACCGGCGGATAGAAGAAGAGATCTCGCATTAATTTTGAATTCGCATT TTATGCTTTTTCATCAACTCCGTTTACTACAATGAAAccttttttaagct aaaaacaTTTAGACCACATATCAAATATCTTCATAgttattcaaaatgaa attaaatttttaaaaaccaacACTTTCGTAAGGACCCCTTTTTAGCCTCA TTTTCAAGTATTGCTTTCCCTTATGACTtgtcaaggaaaatgaaaaacag tGTACTGTAAACACTGTAAATCTTCTATCTTTCTTAATCAGGACGCCGAA GCATCTGAAGAATCGTCAGACGATGTCGCAGATACTGAGGACAACACTGA TGATGCTGCCAAGAGGGATTTCGGCGGTGGACATGAGGGTGGTGGCCATC ACGGAGACGAAGGTGGTCACGAAGGCCAACACGGTCATCACGAACACGAC AATCATCATCACGGTCACCAACATCATGATCATGGTTATGAATTCTATGA AGAATGGGGAGAGCATGGTGGTCATGAAGGTGAACATCATGGACACCACG AAGGAGGACATCACGGTGAGCACGGACATCATCACGGTGGTCACCACGGT GGCGGCGGCGGATACAAACGTGAGAAAGTTGacaaaaccaaaaccaaaac tGCTACCCCTCAAAAAGCTGAAGATGCCACTGACGGTGAAGATGCTTCCA AGAAATGGTGGTTAGTTGGAGATCACTGGGGAGGTTGGGGTCACTCCCAC TGGGGACACCCTCACGCTATTGGTGATGGTGGTGGCTGGCAATGGGGTCA CCATGGCTTACACGGCGGTCACGGTGGTGGCTACGGTGGCGGCTATGGCG GTGGTTTGGGTGGATACGGTGGCGGTTATGGCGGCGGTTTGGGTGGATAC GGTGGCGGCAACGGAGGCTACGGAGGAAATGGCGGTGGTTGCGGTCATGG TGGCTGCGGAGGAGGATATGGTGGCTATGGAGGTCATGGATATGGCGGAA ACGGCCATGGTGGATGTGGACACGGTGGTTGTGGTGGACACGTTGGTGGT CACTACAAGAGCAAAATCCCTGACTGTTGCAAATCCAAAGATCCAAAGGT CACCAAGAGATGTGGATGCCATTTGGGAACAACTGGACACGGTGGGTACC ATTTTAGTGATCATGGTTCAGGGCATGATAACCATGATCATCGCATCCAA GGCCCATGGAGTTTCGGATATGACCATTTCGGGGATGATTGGTCTGACTG GGATCATAACACGCATTCGTTCCGTTATTTGACTGATATGACTCACTTGC CACATGATGATCATTGTGGACATGGCCGTGCATGTGTTCCATTGAACGGT GTTCACCGATTCTCACGATTTTATCCTTCTCTTCATTTTGAAGGTCCAGC TGGTAATGGTTTCTTCGGAGGACTCGGTGGTGGATACGGAGGACTCGGTG GTGGATATGGTGGACTCGGTGGTGGATACGGTGGATTGGGTGGTGGATAT GGTGCAGGATCTGGTGGGTTTGGCCTTGGTGGCGCTGTCGGAGGTTGTGG ATGCAATGCCGGTGGTTGCGGTTGCGGCCCTGGTTTCGCTCTTGGTGGTG GCTTGAACAATTACGGTGTATATGGACATTCCGGATGGCCAGTACGCAAA TTCGACAACTACCGTGTTTGTCATAAATGCCACGATCTACCAAGCGGTGG ATCACGATGTCTGTGCAAGAGTGTTCGTCATCATCCATTGTACTTACCTG TTGTTCATCGACCAGCTCACGTCTACATTGATTGCGATACCAGTGCACAC AAATTCGGACACAACAGATGTTACGCCAGAGCTGATATTCCTACTCCTGA AGAAGAAAACACAGAGACTGGTGCAGCCAAACAAGGCGTGTTCTATCCAT ATGCCAACTATGGTCCATGGTCTGCCTACCCATGGTGGGGAGACTGGTGG GGTGGTCACGGTCATCACGCTTTTGGAGAAGGTCACGGTTCGGGTCACGG TCAGGGTCAGGGTCACGGTGGTGGATGCGGTGGATGTGATGGTTGCGGTA ATCACGCAGGCGGTTGCCGAGGTAGATGCTCAGGTTGTGGACACCACGGT ATGGGACGAAATGTTGGATTTAGCTTCGGTCATGGCGCCCATCTTCAAGC TTATNTCATAACACGCATTCGTTCCGTTATTTGACTGATATGACTCACTT GCCACATGATGATCATTGTGGACATGGCCGTGCATGTGTTCCATTGAACG GTGTTCACCGATTCTCACGATTTTATCCTTCTCTTCATTTTGAAGGTCCA GCTGGTAATGGTTTCTTCGGAGGACTCGGTGGTGGATACGGAGGACTCGG TGGTGGATATGGTGGACTCGGTGGTGGATACGGTGGATTGGGTGGTGGAT ATGGTGCAGGATCTGGTGGGTTTGGCCTTGGTGGCGCTGTCGGAGGTTGT GGATGCAATGCCGGTGGTTGCGGTTGCGGCCCTGGTTTCGCTCTTGGTGG TGGCTTGAACAATTACGGTGTATATGGACATTCCGGATGGCCAGTACGCA AATTCGACAACTACCGTGTTTGTCATAAATGCCACGATCTACCAAGCGGT GGATCACGATGTCTGTGCAAGAGTGTTCGTCATCATCCATTGTACTTACC TGTTGTTCATCGACCAGCTCACGTCTACATTGATTGCGATACCAGTGCAC ACAAATTCGGACACAACAGATGTTACGCCAGAGCTGATATTCCTACTCCT GAAGAAGAAAACACAGAGACTGGTGCAGCCAAACAAGGCGTGTTCTATCC ATATGCCAACTATGGTCCATGGTCTGCCTACCCATGGTGGGGAGACTGGT GGGGTGGTCACGGTCATCACGCTTTTGGAGAAGGTCACGGTTCGGGTCAC GGTCAGGGTCAGGGTCACGGTGGTGGATGCGGTGGATGTGATGGTTGCGG TAATCACGCAGGCGGTTGCCGAGGTAGATGCTCAGGTTGTGGACACCACG GTATGGGACGAAATGTTGGATTTAGCTTCGGTCATGGCGCTCATCTTCAA GCTTATCATTGTAAAGATCAAGTTGAGAAAGTGAATGGAGCTGATGACCA CGAAGATGCAACCACCAAGCGATTCTGCGTTCCCATTGGATACAATGGTG GATACGGTTTCCCATACTTTCACGGATATCCAGGAGTCGGTACGGGACTA TGGGGATGGGGATGGCCTTGGATCAAGAATAAGGTCCCTGGANGACTCGG TGGTGGATACGGAGGACTCGGTGGTGGATATGGTGGACTCGGTGGTGGAT ACGGTGGATTGGGTGGTGGATATGGTGCAGGATCTGGTGGGTTTGGCCTT GGTGGCGCTGTCGGAGGTTGTGGATGCAATGCCGGTGGTTGCGGTTGCGG CCCTGGTTTCGCTCTTGGTGGTGGCTTGAACAATTACGGTGTATATGGAC ATTCCGGATGGCCAGTACGCAAATTCGACAACTACCGTGTTTGTCATAAA TGCCACGATCTACCAAGCGGTGGATCACGATGTCTGTGCAAGAGTGTTCG CCATCATCCATTGTACTTACCTGTTGTTCATCGACCAGCTCACGTCTACA TTGATTGCGATACCAGTGCACACAAATTCGGACACAACAGATGTTACGCC AGAGCTGATATTCCTACTCCTGAAGAAGAAAACACAGAGACTGGTGCAGC CAAACAAGGCGTGTTCTATCCATATGCCAACTATGGTCCATGGTCTGCCT ACCCATGGTGGGGAGACTGGTGGGGTGGTCACGGTCATCATTCTTGGGGA GAAGGTCACGGTCAGGGTCACGGTGGTGGATGCGGTGGATGTGGTGGTTG TGGCCATCACGCAGGCGGTTGCCGAGGTAGATGCTCAGGTTGTGGACACC ACGGTATGGGACGAAATGTTGGATTTAGCTTCGGTCGTGGCGCTCATCTT CAAGCTTACCATTGTAAAGATCAAGTTGAGAAAGTGAATGGAGCTGATGA CCACGAAGATGCAACCACCAAGCGATTCTGCGTTCCCATTGGATACAATG GTGGATACGGTTTCCCATACTTTCACGGATATCCAGGAGTCGGTACGGGA CTCTGGGGATGGGGATGGCCTTGGATCAAGAATAAGGTCCCTGGATCCAA ActcaaagaaaagaaagtgACATCCAAAGATAGCTCAGCATCCAAATCTA CCAAGGATACTGCTTCTAAAGATACAAAGAAGAGTGCTATCCCAAGACGA CAAACCAAAAAACAAACCATCCATGTTGGTTACGGATACGCAAGTGGCGA CAATTATCGCCTCGGATACGGAATGGGCGGCATGGGTGGCGTGGCTGGAT TCACATCACCCCACGGTGCACCTTTAACACAGTTCGCACGCTCACGAATT CCAGCTGCTGAATCAACGAAAGATGTCACCGGTACCAAACGAAACATGGC TTTTTCTCAAGAACCATCATCTACAGGATCAATGTTAGGACATCCAGTCA CACACCCAGGGTTTACAACCATGGGATTCCCAGGGCACGCTGATTCATCT ATCGAAGCACAAAAATCAAGGATCCCaaagaaattgtaaatttatcGCAA TCACCAACCTAATGTAAGTTTACCTCAGATTTATAATTTGGCTTTATACA GGGAACTAATTACGTTACGTTTATGAGAGAAACCTCCTTAGGCTAAAATC AAATGTGATATTTGTAGATATTTTTTTCTTCGCTTTTGTTATTAAATTTG GACTGAAGTTTTGATTTTGttattgaaaactttttgctttCAATTGATTT TTCATTGACCAATCAAACAAAAGAATCAATCATTATAATTGGTATTGTGA TTTATTTTCCTATATTTTATCTTTACAGGTCTAACCTATATTTGTATTAC ATCCATCCATCCACTCACCATACAAGATGATGTTATCCTGTTATTAATTG GTGTTATAACGTCCCAATAGTACCATAGTTCGTCTTTATAATTGTGTTAT TCTGTAATACGTAGCTCTTGTAATAACCCCATATTTGTTAATGTAGTTTT ATGTATGTTTTATTATGTGTGTTAGATCATTTGTAAGATCACTCATTATA ttattaggcgagaccaatttaatttgttgttctacgggcccgaccgaccc tattttcactaaaatcaaaaaaataataatattgaattcccactacaata tattttacacactagttatttgtaagaatcaaatttgaatataacGATCT GCccttagaacaacaaattaaattggtctcgccttatttAACAAAATAGT CGTGTTATATGATTTTAACCATTTGTACAATAGATTTTATTCTAATAGAA AAattaatcaaagtcaatttcacaTTTTATATTATCTCCAAGAGTGCAGG TCAAATTTTATCTCACCCGcaaccaaaaaattttttcccaaaattgctAT CCCgaaaaatctcgttttttctttgtcaatttGATTTAGGTTCACATTTA TGTTGTCTCCAAGAGTGCAGGTCAAATTTTATCTCAGCCGCAACCAaaac ttttttcccaaaattgctATCCCgaaaaatctcgttttttctTCCCTATG AGAAGTCAAAGTTACCTCACAAGATTTTAGCATTTCCTAGAATGCTTCGT TTAAGTCAAATAGCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047160TCONS_00047160Clytia hemisphaericatranscript
TCONS_00047161TCONS_00047161Clytia hemisphaericatranscript
TCONS_00047162TCONS_00047162Clytia hemisphaericatranscript
TCONS_00047163TCONS_00047163Clytia hemisphaericatranscript
TCONS_00047164TCONS_00047164Clytia hemisphaericatranscript
TCONS_00047165TCONS_00047165Clytia hemisphaericatranscript
TCONS_00047166TCONS_00047166Clytia hemisphaericatranscript
TCONS_00047167TCONS_00047167Clytia hemisphaericatranscript
TCONS_00047168TCONS_00047168Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047160-proteinTCONS_00047160-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:57464..66929 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.91 0.59 0.69 0.95 15.33 17.33 240.31 256.78 43.87 44.81 236.78 171.25 292.53 250.22 208.47 598.45 312.89 293.43 0.49 1.12 176.78 194.77 177.84 179.83 254.25 300.02 35.72 10.44 2.17 2.74