XLOC_041762 (gene) - C. hemisphaerica

Overview
NameXLOC_041762
Unique NameXLOC_041762
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_46:207317..215828-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041762 ID=XLOC_041762|Name=XLOC_041762|organism=Clytia hemisphaerica|type=gene|length=8512bp|location=Sequence derived from alignment at scaffold_46:207317..215828- (Clytia hemisphaerica)
TTAGAAGTCAATTTCAGATATAATAAATCAACATTCCAAGTAAATAAAAA GATGACATTAGATTGGCCATTGCATTATGAAGTTGTTGCCAAATGCTCTA AAAGTAAAGGACGAGCCTCACTGATGAGGCTACCTCATTTTACAGTTGAG ACACCTATCTTTATGCCTGTTGGTACCCAAGGTACAATGAAAGGGTTGAC CTGTGATCAGTTACGTGAACTTAATTGTCAAATCATCCTGGCCAATACTT ATCACTTAGGAATGAGACCAGTAAGTATATTTGTGATATGCAGCATTGCA ATATCTTCCACGGACCCAACAGCTGATTGGTTCGTGCAAGTGACGTATTG ACTGATTTTACGTCATTTACAACAAATCAGCTGCTGGGTCATGTAGACAT TGCAATGGCGCATATCATGAATTTGTGCATTTATTTTGTATTTTTCGCTT TATTTGATTATGTTTGAAAAGTGTTTTTATGCTTATTAAAATGTTTTGTA ACTATTATTTTAGCTCTTTTTAAAGATTTTATTTTTACATAAGTGTTCCC GTTTCATATCAGAAACATAAGGACAGTGTGTCTGGCCTTTTGTTATATTG TGCTGATATAAACAAAAAATGTTTTTCTTGCCCTCTTTTTGATCAATCTT GATTCACATCCGTGTCAATCCAATGTGAAAAAGCAAACGATATCACTCTT ATTTAAAATAAAACCTTTCAATTTCAATTAAAATCGTCAATCTTAGAAAC TGAAATGTAATGTTGCTTGGGCGGTGATGATTGTTGCTCCCATGAACGTA CTTGTGAGAGCATTTCGCTAGCCCACGCTTGTTCGAGTAATGTTGCCGTT ACGCCACGGCTCACATGGTATCCTTGTAATGTACCGTGTCTGACCTGAAA TATATTTCATTTATAATATGACAGTCTCTTTTTAACGTAAATTGCGAATT AATTCTTTAGAAATAATAATAATGGGCTTTTCCAGAAAATATTAGAATTT GGAAGGGGCGTGGAGTAACTTAAACCGCCGGACAAGGCAAATTTTGTAGA TTTTTCACTACCCCCTGGACACTATAGCCTCCCCCCTCGTGTACGAACAT TTTTTGGAAGAGCCTAATATAATAATGAATCACAAAACTCGAGATCTATC ATTTTGATGCAGCAGGACAATAATCCGAAAATATTTCTGTGAATATCGTT TGTTGAACAACGCAAAAAAAATCGTCTGATTTAAAAGGCCAACTCATTTA TTTTATCTATCCCTACAATTCTCTAGGGTGAGGATGTATTGAATAAAGCA GGAAGGTTACACAAATTCATGGACTGGGACAGGGGAATGCTCACGGTACG TTTTCATATTGAATTGTTTAAATATTTGTAGCATTTCAGATCTTAATAAT TTTCTACTTTATCCTCAATGTGTATGCTTTGACAACCTTTGATGTTTCTT GAGATAATAAGCCTTTTTATACGTTTCCATCCATATTGACATTGAATGAA TTAATGAAAGCCTTCTCTTTCTACTGAAATATAAATTGTTGCTTTTAACC TATTGTAAATAACCTGACTTCCTTCTCTTAGGACAGTGGAGGATTTCAAA TGGTTTCTCTCATCTCTCTGTCAGAAGTCACTGAGGTTTGCTACTAATTT GTTAAACCATATGAAAGCCTTGGAAACTATTGTTAAAGATTATTACACGA AACCTTTTTATTTGTTAATCTTTGGCAACTATTGCTAAAGGTCACTGCAC GAAGCCTAATTTTATTTGTTAGAAAATATCTTTGTCCGAATCGGTCAAAA GGATTTCTTCATTTTTGTGTACTCTTTGAATCGTCCATAAATACCTAGTA TCTATGCATGCCTTACTGATCCCAATCTTTCNAACAACGCAAAAAAAATC GTCTGATTTAAAAGGCCAACTCATTTATTTTATCTATCCCTACAATTCTC TAGGGTGAGGATGTATTGAATAAAGCAGGAAGGTTACACAAATTCATGGA CTGGGACAGGGGAATGCTCACGGTACGTTTTCATATTGAATTGTTTAAAT ATTTGTAGCATTTCAGATCTTAATAATTTTCTACTTTATCCTCAATGTGT ATGCTTTGACAACCTTTGATGTTTCTTGAGATAATAAGCCTTTTTATACG TTTCCATCCATATTGACATTGAATGAATTAATGAAAGCCTTCTCTTTCTA CTGAAATATAAATTGTTGCTTTTAACCTATTGTAAATAACCTGACTTCCT TCTCTTAGGACAGTGGAGGATTTCAAATGGTTTCTCTCATCTCTCTGTCA GAAGTCACTGAGGTTTGCTACTAATTTGTTAAACCATATGAAAGCCTTGG AAACTATTGTTAAAGATTATTACACGAAACCTTTTTATTTGTTAATCTTT GGCAACTATTGCTAAAGGTCACTGCACGAAGCCTAATTTTATTTGTTAGA AAATATCTTTGTCCGAATCGGTCAAAAGGATTTCTTCATTTTTGTGTACT CTTTGAATCGTCCATAAATACCTAGTATCTATGCATGCCTTACTGATCCC AATCTTTCCAAACTGCAATACAATATATCCATTCATTTGCCGCAAATAAT GTTTTTTATTGGCCTATTTTTTACTTATTTGCCTTTCACCTTTCAGGAAG GTGTACGTTTTAGTTCGCCTTACGATGGTCGAGATATTCTTCTTACACCA GAAAAATCTATGCAGATACAGAATGCTATTGGAGCTGATATCATGATGCA ATTAGATGACGTAGTCGATGTCAAAGTTACGGGACCGAGAGTAGAAGAAG CAATGCATCGCTCCATTCGATGGCTCGATCGGTGCATTGAAGGTCATCAA CGGAAAGAACATCAGAATTTATTCCCTATCATTCAAGGTGGATTGAATTT GGAACTGAGGACAAAATGTATCGAAGGTACTTGTTATTCTTGAAAAAATT TCTTGCTGGGCCAGATAAATTTGATAAAAAAGTGAAAACTAAAAATTTAA TTTTATTCATTGTTTGAAGTTTCGGTGTCTTCTTTGCACCATGATCATAA GTATAGTAAATACTTGTTATTCGTTAGGAAAAGGAGCCAAGTGGGATGAG TAATAAGCAAAAACCCTTTGTGCGCGCTGTTTTTTTTAAAAAAGTTGAAA TTTTTCTAATTTTTTTTTTTAAAACTCAAAACATTAAAGTGCCATAAAAG CTTGTAGCTTTTGATTTAGAAGATGGTTTTGTTACATTGATAAGCTATTT TTATACTCCTTCTAAAAGCATTCGGCTTATGCCCCTTTAAATCAAGTTGA TATTGATTAGCCTCGAGCTAACTAAGTACACATTGTACTACTTTGCATCA ACTTTAAAGAAAAGAAACATAAACATAAACATAAACACCTTTTAAAAAAT GCAGGGACGTTTCTACCATGGTTATCCTTATAACTTAGCATTTTTACGTT TTGAATTATAGCCATGGTCAAACGCAACATGCCAGGTTACGCAGTTGGTG GTTTGAGCGGTGGTGAGGCCAAGGATGACTTTTGGAAAGTCGTTCATCAT TGCACTAATCTTTTACCGAGAGATAAACCTATCTATGTTATGGGAGTTGG GTGAGTAAAAGTTTTCATTTCGAGATCTCATTTTTTAATTATATTTCACC TCGTCTACTGTTCCACTGTTCTCATTTATTAAATTCCCGTAAACACTCAA AATATGATATATCGAAAAGTGTCAACGATAAGGCTTTGCAACAGATTGAA GTCTCGCTAATGGTTTGTTCTCGCAACTTCAGTTAAGCTAGTGCGAATGT CTGTCTGTCAGTCTGTCCAAAAAATCTGGGACGAAAAATATTGTTTAGCC TGCCAGTGCGGTGCCCTTGTCCCTGTTGTCAATTTATAAAGTAAAGGTAA AGGTTTTGAAATTTATTTTTGTTTAGGTATGCGATAGATTTGGTTGTATG TTCTGCGTTAGGAGCTGATATGTTTGATTGTGTCTACCCCACGCGTACTG CAGTAAGAAATAGTTTATCAAATATTTTTTCATATTATTTCTCCGTTAAA AACTTCATCCGTTGTGCTTTTCAAAGGTTAAAGAAAGTCTTTCGAAAGAT GGCACTCAAATTTTCAATTTTGTCTAAATCCAAAGATTGACCAATTTTTC TTGACTGATCGGTTGATACTTCTAGACTCCTGAATGCCTGATAATCTTGA AATCCTCATATAAAAGCTTTTCAATAAACGCCCAATGTTAACAAATACAT TCAATCGAACGAAACTTAAACATTTTTAAATGTAATTTTTTGATTAAAAT TTCTTTTCAGAGGTTCGGTACAGCATTGGTGCCATCTGGTCAGCTGCATC TCAAAACAAACCAATATGCTGACGATTTCAGGCCCATTGACGACCAATGT ACTTGTTTAACGTGTCGCAAATATACAAGAGCTTTTATCCATAGTTTGGT TGGCAAGGAATCAGTTGCTTGTTACCTTTTATCCATCCATAATATCAAGT ATCAGGTCAGGATTTTCAATATAAATTATCCAGTTTGATGGTTTTATTTA TTGAATAATTCCACCCATAAGTCCACACAACAATCAAATCAATCTGATTG GTTGAATCTGAAAAGTATGATGTAATTGAGTCAAATAAACCAATCAGTTG AGCGGACTGTGGGATAGTTAGCCGTAAGTACGGTGATGATGCCAGTGAGT GGTCTTTTCAAATGTTACTTTGAACGAAGAAATTTCCTTTTCTTGTGCTA TGACCAAATTTTATCACTAAAAAGATGAGACTTCAGTGCTTGCTTTCGAG TGTTCAACTCTGTTTTAGATAAACCAATTAGCGGGGACTCGATATCTGAC AGCTAAGGTGACGNGTGTTCAACTCTGTTTTAGGTAAACCAATTAGGGGG GACTCGATTTCTGACAGCTAAGGTGACATTTTTAAACAGCTTGGAGCTTG GATCATCACTCACTATTTTATTCCCACAATTTTGCTTTCAGATGAACCTT ATGACCACGTTACGTCAAAGTATAATCGACGATCGATTGGAAGATTATAT ACAACAATTCTTCTTGAAAATGTTCCCTAATAAAGACTATCCTTCGTGGT GCATAAACGCTCTTGATGCTGTCAATATACAACTTGTCACGTGATACTTA CATAAGAATGAATAGTATGGTGGGATGGTTTTATAGGTGGATGGATGAGC AGGTTTTATTTATTTGTCTCACATTTTTATACTTTATTGGCTACAAGAGT TATATGTTTTCAAAATAATGGTATCTTTGAAATTAAGCTTTCGTTTTTTA TGTTTTTTTATTGTCACTAGTCTAACTGACCAAAGGCAGTCACGACGTAT CAAGTACGACTTTAGGAAGACCGCTTAAGCCTTTTTAACCCTATTAGCCC CAGGGGGGGGGGGTAGAATCTACCACGCTGGAGTTCTTTTGTTTATATCT CAAAGAAAAATTTTTTAAACGACTTAAAACTTTCTGACTTTTAGTAAAAT CTTATTAAGAGTACTTGTGCAAAATTTTAGGGTCATAGGTTGTCCATATC AGGTTTTATGACTTTATCGTGAAACATGACATAAAACCCAGCTAAAATCA CTTAAAACTCAAAACTTTAAAGTGCTGATAACTTCTAAACTATTTATTCA ATCATTTTCAAATTTTGACACGTGATAGGCATTGATAATACAAATTTAAA AAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAA AATTTTACTCATCTTCAGCATAGATTTTAAGAAAAACTCTTCATGGAAAT TGCAAAACCGGCAATTATGTTAAAGAACAGTCTTTTACCTTTCAAAATCT TCAAACAGAATTGAAATATCTTTATTGGTTCAACTGTAATAGACATTTTT GTAAACCATATATTGGGACTTTTTTTCCAAAAGGTCGAAATTTTGTGATG ACGTCATCAGTTTTTGCATGACGTCATCAATTTTTTTTTCTTCCTGGAAA ATTCTATCATGATGGAGAAAATCTGTACCAAATTTCATGGCCATAGCTCT TCTAGATCGAAAATAATCGAGGGTGGTAGATTCTACCCCCCCCCCCCCNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTGAGCAGGTTTTATTTATTCGTCTCACATTCTTATACTTTATTGGC TACAAGAGTTATATGTTTTCAAAATAATGGTATCTTTGAAATTAAGCTTT CGTTTTTTATGTTTTTTTTTATTGTCACCAGTCTCTCTGACCAAAGGCAG TCACGTCGTATCAAGTACGACTTTAGGAAGACTGCTTAAGCCTTTTTAAA GCTTTTTGTAAATTATTTACATCTGCCGTGAAGCCGACTTAAAAGATCTC CGTCAAACAGTTTGAGCATAATAGAAAAATCGTTTTAATTACGTTTGAAA GTTACTCATGTTGAGAATTTTCATGTTTGCTTCATTTTTCATTTTTGTTC AATCTACAATTGAAAAATTTATATGGAATATCGATAAAATAACTTTTTCA TGAAGTTTTTTATATGGGCGTTGAATGACATTGACTATGGCTGGAACCAT GTAAGAATAATTCTTTTCATTTTTACAACAGTTTACTTTTTGTTTATCTT ATTTTAAATATCAATTCAAGCATTTTCTACTCGTTGTTAAAGCTTTTCTC TCTGCCGTCTCAAATTGTTAAATTATGAGCCACAGTTGTTGAACACACTA CTTTTTCAAGTGGCCGATGAAATTTCCAAGCCAAATTTGATCAGGGCCAA CATTGAATATGATAGAAGGTTTCTCTTATTACACGACTATAGATTCATCG GGAGTCCTTACATCAAAATTGATTGATTGTGGGAAAAAATTCTACTGTTT CAAAAGGATTTCCCTTGTTTTGGATATCTGGGTGACTTTTAGCCGAATTT CAGAAACTAGGGATCCCTCGGGGGCAAATGGAATAAAGGGAAACTGGCCA TCGGTCACTGGATAGAGGAGTGTGTTTGTGTTCAATAACTCTGGCTGGGA GATAAAAATGATTCGATTTTAGCAGAATTTCAGTGGAGTATTATCAAAAA AGTAAGTAATTTATAGCATATCCTAAAATTTATAACCCGAACGAATAAAA AAACAGTAAAAAGCTCATGGTTATTGTTTTTTTTCTCAGGAAATGTTTAT GCTCATTGGTGGTTCTGTTGATCCTTGTTGTTCAGAGTTTGGGTAAGTAA TAATTTCTTAATTTCTTAATTTTAGATCATTCAGTGAGATAGGGGTTGTC TTTTCTGACTCTCTTTTTAGTGTGAGAAATGGTGTTTTATGTCACCAGGC TGTCAGGAGAAATTAATAGTCTCTGGTTCTGTTGACCAGAGTTTAGAGGT GTAGAAAAAAAATCGAATCAGCTTAATTTTAAACATATTGATATTATTAT CGCTGTAATGACTGCCTTTTTTCGGTGTACAAACTTTCTCTCAAACTAAT ATCAATGGCTCCAGTTATCTTACAGTCTACATCTAACTTTTCGCATTCTA TCAACGTTTAGGTGCTCCACGACACCGTCACACACACAACGAAAAAGCAT CGGCTAGAAGTTATATCGACATTGATGCATCGGACCCTTTCAAAGTTCCT AAGAACAGTCATTATATGGAAAATGATATTCCTGAAAATTTCGAAAAAGA AGAACCAGAATTGAAAGCCAGTGTCTCGGAAGGCGAAGAAAGTCCCGCCC CTCAAGAACAGGGCGGAGATGAATCTGAACACGAATCAAACGGAGAGCAA CCGCCAAGTGAACCTCAAGAAGAAGAGGGCGCCGGGCGTGAAGGTCCAGA CGCCAAAGAAGGTGCGTCAAAAGAATTGCCTCAGGAGCAACCTTCTCAGG GACAAAATGGAGGAGGTTTGAACGACTTACCGCCAGGGATAACGGAAAAG ATTGACGAGATAGCAAAGAACCAAGGAAACAGTGACGGAAAACCCATTGA AATTAATGAAAATGATTTGAAAGGAATGGTGAACAATGCTGGCGGTGCAC CTCAGGCTGAGGGCGGTCCTCCTGCTGGGGAAGGTGCAGCAGAAGGGGAG GAAAATTAGATAGAGTGTACTTCTCGACCTGTTTTGAAAAGCAACGCTTT ATGGATGTATACCTGACAATGGACCATATCGAAAACTTTTATTACGCACA CCTTTTTCTTCTATTTTGTAATTTTCTTTCGTTTGACAATTTTAAATAGT TTTGACATTTTCGACAATAATTCGAAGCTAGCAAAGATAAATGTAGGAAT CAAATAAACCATTAGTCGTTTTGGTGTTTCGGGTCTTATTTGCATTTTTC TAGGACTTTCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066787TCONS_00066787Clytia hemisphaericatranscript
TCONS_00066786TCONS_00066786Clytia hemisphaericatranscript
TCONS_00066785TCONS_00066785Clytia hemisphaericatranscript
TCONS_00066784TCONS_00066784Clytia hemisphaericatranscript
TCONS_00066783TCONS_00066783Clytia hemisphaericatranscript
TCONS_00066782TCONS_00066782Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066783-proteinTCONS_00066783-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_46supercontigscaffold_46:207317..215828 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
QTRT1queuine tRNA-ribosyltransferase Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.52 36.03 12.01 8.99 8.16 7.67 26.72 28.08 19.06 15.98 31.94 34.39 35.35 30.81 29.97 53.16 32.64 32.77 12.81 10.64 22.06 22.33 34.82 32.37 27.76 26.84 16.52 18.12 21.19 22.52